Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Prpf38bQ80SY5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Prpf38bQ80SY5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Prpf38bQ80SY5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Prpf38bQ80SY5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Prpf38bQ80SY5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Prpf38bQ80SY5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.65■■□□□ 1.22
Prpf38bQ80SY5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Prpf38bQ80SY5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Prpf38bQ80SY5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Prpf38bQ80SY5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Prpf38bQ80SY5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Prpf38bQ80SY5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.64■■□□□ 1.21
Prpf38bQ80SY5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Prpf38bQ80SY5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf38bQ80SY5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Prpf38bQ80SY5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf38bQ80SY5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Prpf38bQ80SY5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf38bQ80SY5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf38bQ80SY5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Prpf38bQ80SY5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Prpf38bQ80SY5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.61■■□□□ 1.21
Prpf38bQ80SY5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.61■■□□□ 1.21
Prpf38bQ80SY5 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.61■■□□□ 1.21
Prpf38bQ80SY5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf38bQ80SY5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.6■■□□□ 1.21
Prpf38bQ80SY5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.6■■□□□ 1.21
Prpf38bQ80SY5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf38bQ80SY5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Prpf38bQ80SY5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf38bQ80SY5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf38bQ80SY5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Prpf38bQ80SY5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.59■■□□□ 1.21
Prpf38bQ80SY5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.59■■□□□ 1.21
Prpf38bQ80SY5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Prpf38bQ80SY5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf38bQ80SY5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf38bQ80SY5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf38bQ80SY5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf38bQ80SY5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.58■■□□□ 1.21
Prpf38bQ80SY5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Prpf38bQ80SY5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Prpf38bQ80SY5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Prpf38bQ80SY5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Prpf38bQ80SY5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Prpf38bQ80SY5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf38bQ80SY5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Prpf38bQ80SY5 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.57■■□□□ 1.2
Prpf38bQ80SY5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Prpf38bQ80SY5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf38bQ80SY5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Prpf38bQ80SY5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf38bQ80SY5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf38bQ80SY5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Prpf38bQ80SY5 Gm9847-201ENSMUST00000052528 599 ntBASIC22.56■■□□□ 1.2
Prpf38bQ80SY5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Prpf38bQ80SY5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf38bQ80SY5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf38bQ80SY5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Prpf38bQ80SY5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Prpf38bQ80SY5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf38bQ80SY5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf38bQ80SY5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Prpf38bQ80SY5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.53■■□□□ 1.2
Prpf38bQ80SY5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf38bQ80SY5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Prpf38bQ80SY5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.52■■□□□ 1.2
Prpf38bQ80SY5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Prpf38bQ80SY5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Prpf38bQ80SY5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.5■■□□□ 1.19
Prpf38bQ80SY5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf38bQ80SY5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.49■■□□□ 1.19
Prpf38bQ80SY5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf38bQ80SY5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.49■■□□□ 1.19
Prpf38bQ80SY5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf38bQ80SY5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Prpf38bQ80SY5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Prpf38bQ80SY5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms