Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VcanQ62059 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VcanQ62059 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VcanQ62059 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VcanQ62059 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VcanQ62059 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21■□□□□ 0.95
VcanQ62059 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VcanQ62059 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VcanQ62059 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VcanQ62059 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VcanQ62059 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VcanQ62059 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VcanQ62059 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VcanQ62059 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VcanQ62059 Gm40881-201ENSMUST00000223397 166 ntBASIC20.98■□□□□ 0.95
VcanQ62059 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VcanQ62059 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VcanQ62059 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VcanQ62059 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.98■□□□□ 0.95
VcanQ62059 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
VcanQ62059 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VcanQ62059 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.97■□□□□ 0.95
VcanQ62059 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VcanQ62059 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VcanQ62059 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.96■□□□□ 0.95
VcanQ62059 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
VcanQ62059 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VcanQ62059 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.96■□□□□ 0.95
VcanQ62059 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VcanQ62059 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VcanQ62059 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.96■□□□□ 0.95
VcanQ62059 Gm6139-201ENSMUST00000079261 882 ntBASIC20.96■□□□□ 0.95
VcanQ62059 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VcanQ62059 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.95■□□□□ 0.95
VcanQ62059 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VcanQ62059 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VcanQ62059 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VcanQ62059 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VcanQ62059 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VcanQ62059 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VcanQ62059 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VcanQ62059 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VcanQ62059 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VcanQ62059 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VcanQ62059 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.94■□□□□ 0.94
VcanQ62059 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.94■□□□□ 0.94
VcanQ62059 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VcanQ62059 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VcanQ62059 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VcanQ62059 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.93■□□□□ 0.94
VcanQ62059 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VcanQ62059 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VcanQ62059 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VcanQ62059 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VcanQ62059 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.92■□□□□ 0.94
VcanQ62059 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VcanQ62059 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VcanQ62059 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VcanQ62059 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.92■□□□□ 0.94
VcanQ62059 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VcanQ62059 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VcanQ62059 Gm10849-201ENSMUST00000100397 618 ntBASIC20.91■□□□□ 0.94
VcanQ62059 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.91■□□□□ 0.94
VcanQ62059 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VcanQ62059 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.91■□□□□ 0.94
VcanQ62059 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VcanQ62059 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VcanQ62059 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VcanQ62059 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.91■□□□□ 0.94
VcanQ62059 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.91■□□□□ 0.94
VcanQ62059 Gm5874-201ENSMUST00000096101 508 ntBASIC20.91■□□□□ 0.94
VcanQ62059 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VcanQ62059 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
VcanQ62059 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VcanQ62059 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
VcanQ62059 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VcanQ62059 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VcanQ62059 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VcanQ62059 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VcanQ62059 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VcanQ62059 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
VcanQ62059 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.89■□□□□ 0.93
VcanQ62059 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VcanQ62059 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VcanQ62059 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VcanQ62059 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VcanQ62059 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.88■□□□□ 0.93
VcanQ62059 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VcanQ62059 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.88■□□□□ 0.93
VcanQ62059 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VcanQ62059 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VcanQ62059 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.87■□□□□ 0.93
VcanQ62059 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VcanQ62059 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VcanQ62059 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VcanQ62059 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VcanQ62059 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VcanQ62059 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VcanQ62059 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VcanQ62059 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 155.4 ms