Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 HDA1YNL021W 2121 nt10.48□□□□□ -0.73
TY1B-DR4Q07793 APE3YBR286W 1614 nt10.48□□□□□ -0.73
TY1B-DR4Q07793 PGU1YJR153W 1086 nt10.48□□□□□ -0.73
TY1B-DR4Q07793 YKL151CYKL151C 1014 nt10.48□□□□□ -0.73
TY1B-DR4Q07793 PRB1YEL060C 1908 nt10.48□□□□□ -0.73
TY1B-DR4Q07793 tR(ACG)DtR(ACG)D 73 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 tR(ACG)EtR(ACG)E 73 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 tR(ACG)KtR(ACG)K 73 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 tR(ACG)LtR(ACG)L 73 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 tR(ACG)OtR(ACG)O 73 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 YMR119W-AYMR119W-A 375 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 ALD5YER073W 1563 nt10.47□□□□□ -0.73
TY1B-DR4Q07793 TIM54YJL054W 1437 nt10.46□□□□□ -0.73
TY1B-DR4Q07793 RPL21AYBR191W 483 nt10.46□□□□□ -0.74
TY1B-DR4Q07793 SHM1YBR263W 1473 nt10.46□□□□□ -0.74
TY1B-DR4Q07793 NOB1YOR056C 1380 nt10.45□□□□□ -0.74
TY1B-DR4Q07793 RTG2YGL252C 1767 nt10.45□□□□□ -0.74
TY1B-DR4Q07793 NDC1YML031W 1968 nt10.45□□□□□ -0.74
TY1B-DR4Q07793 GTT3YEL017W 1014 nt10.45□□□□□ -0.74
TY1B-DR4Q07793 SLO1YER180C-A 258 nt10.45□□□□□ -0.74
TY1B-DR4Q07793 YAP1801YHR161C 1914 nt10.45□□□□□ -0.74
TY1B-DR4Q07793 GUD1YDL238C 1470 nt10.44□□□□□ -0.74
TY1B-DR4Q07793 YCR097W-AYCR097W-A 267 nt10.44□□□□□ -0.74
TY1B-DR4Q07793 GIR2YDR152W 798 nt10.44□□□□□ -0.74
TY1B-DR4Q07793 SEC20YDR498C 1152 nt10.44□□□□□ -0.74
TY1B-DR4Q07793 RPT6YGL048C 1218 nt10.44□□□□□ -0.74
TY1B-DR4Q07793 CIS3YJL158C 684 nt10.44□□□□□ -0.74
TY1B-DR4Q07793 YGL235WYGL235W 537 nt10.43□□□□□ -0.74
TY1B-DR4Q07793 YGR176WYGR176W 348 nt10.43□□□□□ -0.74
TY1B-DR4Q07793 HSX1tR(CCU)J 72 nt10.43□□□□□ -0.74
TY1B-DR4Q07793 SPE4YLR146C 903 nt10.41□□□□□ -0.74
TY1B-DR4Q07793 YNR014WYNR014W 639 nt10.41□□□□□ -0.74
TY1B-DR4Q07793 ARC35YNR035C 1029 nt10.41□□□□□ -0.74
TY1B-DR4Q07793 BBP1YPL255W 1158 nt10.41□□□□□ -0.74
TY1B-DR4Q07793 YDL034WYDL034W 345 nt10.4□□□□□ -0.74
TY1B-DR4Q07793 QNS1YHR074W 2145 nt10.4□□□□□ -0.74
TY1B-DR4Q07793 THI2YBR240C 1353 nt10.4□□□□□ -0.74
TY1B-DR4Q07793 YER137CYER137C 447 nt10.4□□□□□ -0.75
TY1B-DR4Q07793 DJP1YIR004W 1299 nt10.4□□□□□ -0.75
TY1B-DR4Q07793 YBR144CYBR144C 315 nt10.4□□□□□ -0.75
TY1B-DR4Q07793 YKR032WYKR032W 315 nt10.39□□□□□ -0.75
TY1B-DR4Q07793 YNL296WYNL296W 315 nt10.39□□□□□ -0.75
TY1B-DR4Q07793 DAL82YNL314W 768 nt10.39□□□□□ -0.75
TY1B-DR4Q07793 GIT1YCR098C 1557 nt10.38□□□□□ -0.75
TY1B-DR4Q07793 YDR154CYDR154C 351 nt10.38□□□□□ -0.75
TY1B-DR4Q07793 YMC1YPR058W 924 nt10.37□□□□□ -0.75
TY1B-DR4Q07793 YDR109CYDR109C 2148 nt10.37□□□□□ -0.75
TY1B-DR4Q07793 EEB1YPL095C 1371 nt10.37□□□□□ -0.75
TY1B-DR4Q07793 TRR1YDR353W 960 nt10.36□□□□□ -0.75
TY1B-DR4Q07793 CAD1YDR423C 1230 nt10.36□□□□□ -0.75
TY1B-DR4Q07793 IPI1YHR085W 1005 nt10.36□□□□□ -0.75
TY1B-DR4Q07793 YJR115WYJR115W 510 nt10.36□□□□□ -0.75
TY1B-DR4Q07793 RTT106YNL206C 1368 nt10.35□□□□□ -0.75
TY1B-DR4Q07793 HXK1YFR053C 1458 nt10.35□□□□□ -0.75
TY1B-DR4Q07793 YHR070C-AYHR070C-A 411 nt10.35□□□□□ -0.75
TY1B-DR4Q07793 MIM2YLR099W-A 264 nt10.35□□□□□ -0.75
TY1B-DR4Q07793 YHM2YMR241W 945 nt10.35□□□□□ -0.75
TY1B-DR4Q07793 COX16YJL003W 357 nt10.34□□□□□ -0.75
TY1B-DR4Q07793 QCR8YJL166W 285 nt10.34□□□□□ -0.75
TY1B-DR4Q07793 SAM4YPL273W 978 nt10.34□□□□□ -0.75
TY1B-DR4Q07793 SMK1YPR054W 1167 nt10.34□□□□□ -0.75
TY1B-DR4Q07793 YOR318CYOR318C 306 nt10.33□□□□□ -0.76
TY1B-DR4Q07793 TAH11YJR046W 1815 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 MCH2YKL221W 1422 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 YCL065WYCL065W 369 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 APS3YJL024C 585 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 BSC4YNL269W 396 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 RPL5YPL131W 894 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 YBR124WYBR124W 360 nt10.32□□□□□ -0.76
TY1B-DR4Q07793 SLA2YNL243W 2907 nt10.31□□□□□ -0.76
TY1B-DR4Q07793 CSG2YBR036C 1233 nt10.31□□□□□ -0.76
TY1B-DR4Q07793 PRC1YMR297W 1599 nt10.31□□□□□ -0.76
TY1B-DR4Q07793 YLR118CYLR118C 684 nt10.3□□□□□ -0.76
TY1B-DR4Q07793 AGP2YBR132C 1791 nt10.29□□□□□ -0.76
TY1B-DR4Q07793 YLL059CYLL059C 507 nt10.27□□□□□ -0.77
TY1B-DR4Q07793 CHA1YCL064C 1083 nt10.26□□□□□ -0.77
TY1B-DR4Q07793 MRPL4YLR439W 960 nt10.25□□□□□ -0.77
TY1B-DR4Q07793 RDN37-1RDN37-1 5354 nt10.24□□□□□ -0.77
TY1B-DR4Q07793 RDN37-2RDN37-2 5354 nt10.24□□□□□ -0.77
TY1B-DR4Q07793 MET2YNL277W 1461 nt10.24□□□□□ -0.77
TY1B-DR4Q07793 MHR1YDR296W 681 nt10.24□□□□□ -0.77
TY1B-DR4Q07793 RCL1YOL010W 1104 nt10.24□□□□□ -0.77
TY1B-DR4Q07793 KKQ8YKL168C 2175 nt10.23□□□□□ -0.77
TY1B-DR4Q07793 YPL277CYPL277C 1464 nt10.23□□□□□ -0.77
TY1B-DR4Q07793 CYB2YML054C 1776 nt10.22□□□□□ -0.77
TY1B-DR4Q07793 GSH1YJL101C 2037 nt10.22□□□□□ -0.77
TY1B-DR4Q07793 FAA4YMR246W 2085 nt10.22□□□□□ -0.77
TY1B-DR4Q07793 YRA1YDR381W 681 nt10.22□□□□□ -0.77
TY1B-DR4Q07793 ATO3YDR384C 828 nt10.22□□□□□ -0.77
TY1B-DR4Q07793 VRP1YLR337C 2454 nt10.21□□□□□ -0.77
TY1B-DR4Q07793 tN(GUU)CtN(GUU)C 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)FtN(GUU)F 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)GtN(GUU)G 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)KtN(GUU)K 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)LtN(GUU)L 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)N1tN(GUU)N1 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)N2tN(GUU)N2 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)O1tN(GUU)O1 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)O2tN(GUU)O2 74 nt10.21□□□□□ -0.78
TY1B-DR4Q07793 tN(GUU)PtN(GUU)P 74 nt10.21□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms