Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx3-2P97503 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.48■□□□□ 0.87
Nkx3-2P97503 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx3-2P97503 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx3-2P97503 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nkx3-2P97503 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx3-2P97503 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nkx3-2P97503 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx3-2P97503 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx3-2P97503 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx3-2P97503 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx3-2P97503 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx3-2P97503 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx3-2P97503 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.45■□□□□ 0.86
Nkx3-2P97503 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.45■□□□□ 0.86
Nkx3-2P97503 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx3-2P97503 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx3-2P97503 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nkx3-2P97503 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx3-2P97503 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Nkx3-2P97503 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx3-2P97503 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.41■□□□□ 0.86
Nkx3-2P97503 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx3-2P97503 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx3-2P97503 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.4■□□□□ 0.86
Nkx3-2P97503 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx3-2P97503 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
Nkx3-2P97503 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Nkx3-2P97503 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx3-2P97503 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx3-2P97503 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.39■□□□□ 0.85
Nkx3-2P97503 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx3-2P97503 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.39■□□□□ 0.85
Nkx3-2P97503 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx3-2P97503 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx3-2P97503 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.38■□□□□ 0.85
Nkx3-2P97503 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Nkx3-2P97503 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx3-2P97503 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx3-2P97503 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx3-2P97503 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx3-2P97503 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.36■□□□□ 0.85
Nkx3-2P97503 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.36■□□□□ 0.85
Nkx3-2P97503 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx3-2P97503 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx3-2P97503 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx3-2P97503 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.36■□□□□ 0.85
Nkx3-2P97503 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.35■□□□□ 0.85
Nkx3-2P97503 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx3-2P97503 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx3-2P97503 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nkx3-2P97503 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx3-2P97503 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx3-2P97503 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx3-2P97503 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx3-2P97503 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx3-2P97503 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx3-2P97503 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.34■□□□□ 0.85
Nkx3-2P97503 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nkx3-2P97503 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx3-2P97503 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx3-2P97503 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Nkx3-2P97503 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.33■□□□□ 0.85
Nkx3-2P97503 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx3-2P97503 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkx3-2P97503 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.33■□□□□ 0.84
Nkx3-2P97503 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx3-2P97503 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx3-2P97503 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
Nkx3-2P97503 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx3-2P97503 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkx3-2P97503 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms