Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Capn1O35350 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Capn1O35350 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Capn1O35350 Gm22567-201ENSMUST00000175542 342 ntBASIC19.97■□□□□ 0.79
Capn1O35350 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.97■□□□□ 0.79
Capn1O35350 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Capn1O35350 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Capn1O35350 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.97■□□□□ 0.79
Capn1O35350 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.96■□□□□ 0.79
Capn1O35350 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Capn1O35350 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.96■□□□□ 0.79
Capn1O35350 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Capn1O35350 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Capn1O35350 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Capn1O35350 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Capn1O35350 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Capn1O35350 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Capn1O35350 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Capn1O35350 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.95■□□□□ 0.78
Capn1O35350 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Capn1O35350 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Capn1O35350 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Capn1O35350 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Capn1O35350 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Capn1O35350 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Capn1O35350 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Capn1O35350 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Capn1O35350 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Capn1O35350 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Capn1O35350 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Capn1O35350 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Capn1O35350 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Capn1O35350 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Capn1O35350 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Capn1O35350 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.93■□□□□ 0.78
Capn1O35350 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Capn1O35350 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.92■□□□□ 0.78
Capn1O35350 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Capn1O35350 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Capn1O35350 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Capn1O35350 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Capn1O35350 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Capn1O35350 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Capn1O35350 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.92■□□□□ 0.78
Capn1O35350 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.92■□□□□ 0.78
Capn1O35350 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.91■□□□□ 0.78
Capn1O35350 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.91■□□□□ 0.78
Capn1O35350 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Capn1O35350 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Capn1O35350 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.91■□□□□ 0.78
Capn1O35350 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Capn1O35350 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Capn1O35350 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Capn1O35350 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Capn1O35350 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.9■□□□□ 0.78
Capn1O35350 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Capn1O35350 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.9■□□□□ 0.78
Capn1O35350 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.9■□□□□ 0.78
Capn1O35350 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Capn1O35350 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Capn1O35350 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Capn1O35350 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Capn1O35350 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.89■□□□□ 0.77
Capn1O35350 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Capn1O35350 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Capn1O35350 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Capn1O35350 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Capn1O35350 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.89■□□□□ 0.77
Capn1O35350 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Capn1O35350 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Capn1O35350 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Capn1O35350 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.88■□□□□ 0.77
Capn1O35350 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.88■□□□□ 0.77
Capn1O35350 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Capn1O35350 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Capn1O35350 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Capn1O35350 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Capn1O35350 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Capn1O35350 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.87■□□□□ 0.77
Capn1O35350 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Capn1O35350 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Capn1O35350 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Capn1O35350 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Capn1O35350 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Capn1O35350 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Capn1O35350 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Capn1O35350 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Capn1O35350 Gm15820-201ENSMUST00000201566 728 ntBASIC19.86■□□□□ 0.77
Capn1O35350 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Capn1O35350 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Capn1O35350 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Capn1O35350 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Capn1O35350 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Capn1O35350 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms