Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a4A2AX52 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Col6a4A2AX52 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a4A2AX52 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Col6a4A2AX52 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.41■□□□□ 0.54
Col6a4A2AX52 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.41■□□□□ 0.54
Col6a4A2AX52 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a4A2AX52 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Col6a4A2AX52 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a4A2AX52 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a4A2AX52 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a4A2AX52 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.4■□□□□ 0.54
Col6a4A2AX52 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.4■□□□□ 0.54
Col6a4A2AX52 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.4■□□□□ 0.54
Col6a4A2AX52 Gm45417-201ENSMUST00000209533 758 ntBASIC18.4■□□□□ 0.54
Col6a4A2AX52 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a4A2AX52 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a4A2AX52 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.4■□□□□ 0.54
Col6a4A2AX52 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a4A2AX52 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a4A2AX52 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Col6a4A2AX52 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a4A2AX52 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a4A2AX52 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
Col6a4A2AX52 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.39■□□□□ 0.53
Col6a4A2AX52 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a4A2AX52 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a4A2AX52 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.38■□□□□ 0.53
Col6a4A2AX52 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a4A2AX52 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a4A2AX52 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.37■□□□□ 0.53
Col6a4A2AX52 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a4A2AX52 Gm12821-201ENSMUST00000120022 600 ntBASIC18.37■□□□□ 0.53
Col6a4A2AX52 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a4A2AX52 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.36■□□□□ 0.53
Col6a4A2AX52 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a4A2AX52 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a4A2AX52 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a4A2AX52 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a4A2AX52 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.34■□□□□ 0.53
Col6a4A2AX52 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col6a4A2AX52 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col6a4A2AX52 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col6a4A2AX52 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col6a4A2AX52 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a4A2AX52 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Col6a4A2AX52 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a4A2AX52 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a4A2AX52 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col6a4A2AX52 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Col6a4A2AX52 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col6a4A2AX52 Golgb1-201ENSMUST00000023534 498 ntBASIC18.31■□□□□ 0.52
Col6a4A2AX52 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a4A2AX52 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.3■□□□□ 0.52
Col6a4A2AX52 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a4A2AX52 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a4A2AX52 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col6a4A2AX52 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.29■□□□□ 0.52
Col6a4A2AX52 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms