Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CcsQ9WU84 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.84■□□□□ 0.29
CcsQ9WU84 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CcsQ9WU84 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CcsQ9WU84 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CcsQ9WU84 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CcsQ9WU84 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CcsQ9WU84 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.83■□□□□ 0.28
CcsQ9WU84 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.83■□□□□ 0.28
CcsQ9WU84 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CcsQ9WU84 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CcsQ9WU84 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.82■□□□□ 0.28
CcsQ9WU84 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CcsQ9WU84 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcsQ9WU84 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.82■□□□□ 0.28
CcsQ9WU84 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcsQ9WU84 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcsQ9WU84 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcsQ9WU84 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CcsQ9WU84 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CcsQ9WU84 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcsQ9WU84 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CcsQ9WU84 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CcsQ9WU84 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CcsQ9WU84 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CcsQ9WU84 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.81■□□□□ 0.28
CcsQ9WU84 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CcsQ9WU84 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CcsQ9WU84 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CcsQ9WU84 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcsQ9WU84 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CcsQ9WU84 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.8■□□□□ 0.28
CcsQ9WU84 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcsQ9WU84 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CcsQ9WU84 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcsQ9WU84 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CcsQ9WU84 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.8■□□□□ 0.28
CcsQ9WU84 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcsQ9WU84 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CcsQ9WU84 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcsQ9WU84 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcsQ9WU84 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcsQ9WU84 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CcsQ9WU84 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcsQ9WU84 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcsQ9WU84 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcsQ9WU84 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.78■□□□□ 0.28
CcsQ9WU84 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CcsQ9WU84 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CcsQ9WU84 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CcsQ9WU84 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.77■□□□□ 0.28
CcsQ9WU84 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CcsQ9WU84 Gm30023-201ENSMUST00000197970 889 ntBASIC16.77■□□□□ 0.28
CcsQ9WU84 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CcsQ9WU84 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.77■□□□□ 0.28
CcsQ9WU84 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CcsQ9WU84 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CcsQ9WU84 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CcsQ9WU84 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CcsQ9WU84 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CcsQ9WU84 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CcsQ9WU84 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CcsQ9WU84 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CcsQ9WU84 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CcsQ9WU84 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.75■□□□□ 0.27
CcsQ9WU84 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CcsQ9WU84 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CcsQ9WU84 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CcsQ9WU84 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CcsQ9WU84 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CcsQ9WU84 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CcsQ9WU84 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CcsQ9WU84 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.74■□□□□ 0.27
CcsQ9WU84 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Gm11599-201ENSMUST00000118720 878 ntBASIC16.74■□□□□ 0.27
CcsQ9WU84 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.74■□□□□ 0.27
CcsQ9WU84 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CcsQ9WU84 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.74■□□□□ 0.27
CcsQ9WU84 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.74■□□□□ 0.27
CcsQ9WU84 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CcsQ9WU84 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcsQ9WU84 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CcsQ9WU84 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcsQ9WU84 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcsQ9WU84 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CcsQ9WU84 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcsQ9WU84 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcsQ9WU84 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcsQ9WU84 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CcsQ9WU84 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CcsQ9WU84 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcsQ9WU84 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcsQ9WU84 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CcsQ9WU84 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms