Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccl28Q9JIL2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl28Q9JIL2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl28Q9JIL2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Ccl28Q9JIL2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccl28Q9JIL2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccl28Q9JIL2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl28Q9JIL2 Terc-201ENSMUST00000082862 423 ntBASIC17.65■□□□□ 0.42
Ccl28Q9JIL2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ccl28Q9JIL2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
Ccl28Q9JIL2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.64■□□□□ 0.42
Ccl28Q9JIL2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl28Q9JIL2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl28Q9JIL2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl28Q9JIL2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl28Q9JIL2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl28Q9JIL2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl28Q9JIL2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl28Q9JIL2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl28Q9JIL2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl28Q9JIL2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl28Q9JIL2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.6■□□□□ 0.41
Ccl28Q9JIL2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl28Q9JIL2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl28Q9JIL2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl28Q9JIL2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.59■□□□□ 0.41
Ccl28Q9JIL2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccl28Q9JIL2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl28Q9JIL2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl28Q9JIL2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ccl28Q9JIL2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ccl28Q9JIL2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl28Q9JIL2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl28Q9JIL2 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.58■□□□□ 0.4
Ccl28Q9JIL2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccl28Q9JIL2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl28Q9JIL2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.56■□□□□ 0.4
Ccl28Q9JIL2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl28Q9JIL2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccl28Q9JIL2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccl28Q9JIL2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl28Q9JIL2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccl28Q9JIL2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl28Q9JIL2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccl28Q9JIL2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl28Q9JIL2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccl28Q9JIL2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms