Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mbd3l1Q9D9H3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mbd3l1Q9D9H3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Mbd3l1Q9D9H3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mbd3l1Q9D9H3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mbd3l1Q9D9H3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.05■□□□□ 0.64
Mbd3l1Q9D9H3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Mbd3l1Q9D9H3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mbd3l1Q9D9H3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mbd3l1Q9D9H3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Mbd3l1Q9D9H3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mbd3l1Q9D9H3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mbd3l1Q9D9H3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mbd3l1Q9D9H3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mbd3l1Q9D9H3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mbd3l1Q9D9H3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.01■□□□□ 0.63
Mbd3l1Q9D9H3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mbd3l1Q9D9H3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mbd3l1Q9D9H3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mbd3l1Q9D9H3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Mbd3l1Q9D9H3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Mbd3l1Q9D9H3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Mbd3l1Q9D9H3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Mbd3l1Q9D9H3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mbd3l1Q9D9H3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Mbd3l1Q9D9H3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.95■□□□□ 0.62
Mbd3l1Q9D9H3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mbd3l1Q9D9H3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mbd3l1Q9D9H3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mbd3l1Q9D9H3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Mbd3l1Q9D9H3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mbd3l1Q9D9H3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mbd3l1Q9D9H3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mbd3l1Q9D9H3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms