Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Gm10232-201ENSMUST00000089221 720 ntBASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sec61bQ9CQS8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Gm45102-201ENSMUST00000207427 857 ntBASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Gm7199-201ENSMUST00000118327 1485 ntBASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sec61bQ9CQS8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sec61bQ9CQS8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61bQ9CQS8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sec61bQ9CQS8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61bQ9CQS8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61bQ9CQS8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 Gm14117-201ENSMUST00000122417 843 ntBASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61bQ9CQS8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sec61bQ9CQS8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Etf1-202ENSMUST00000180351 108 ntBASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC11.68□□□□□ -0.54
Sec61bQ9CQS8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms