Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.98■□□□□ 0.31
Cotl1Q9CQI6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cotl1Q9CQI6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cotl1Q9CQI6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cotl1Q9CQI6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cotl1Q9CQI6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cotl1Q9CQI6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cotl1Q9CQI6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cotl1Q9CQI6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cotl1Q9CQI6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cotl1Q9CQI6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cotl1Q9CQI6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.96■□□□□ 0.31
Cotl1Q9CQI6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cotl1Q9CQI6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cotl1Q9CQI6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cotl1Q9CQI6 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.96■□□□□ 0.3
Cotl1Q9CQI6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cotl1Q9CQI6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cotl1Q9CQI6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cotl1Q9CQI6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cotl1Q9CQI6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cotl1Q9CQI6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cotl1Q9CQI6 Particl-201ENSMUST00000205370 1560 ntBASIC16.94■□□□□ 0.3
Cotl1Q9CQI6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cotl1Q9CQI6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cotl1Q9CQI6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cotl1Q9CQI6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cotl1Q9CQI6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cotl1Q9CQI6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cotl1Q9CQI6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cotl1Q9CQI6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cotl1Q9CQI6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cotl1Q9CQI6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cotl1Q9CQI6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cotl1Q9CQI6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cotl1Q9CQI6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cotl1Q9CQI6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cotl1Q9CQI6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cotl1Q9CQI6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cotl1Q9CQI6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cotl1Q9CQI6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cotl1Q9CQI6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cotl1Q9CQI6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cotl1Q9CQI6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cotl1Q9CQI6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms