Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smndc1Q8BGT7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.08■□□□□ 0.97
Smndc1Q8BGT7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smndc1Q8BGT7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smndc1Q8BGT7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.08■□□□□ 0.97
Smndc1Q8BGT7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Smndc1Q8BGT7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smndc1Q8BGT7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smndc1Q8BGT7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smndc1Q8BGT7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smndc1Q8BGT7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smndc1Q8BGT7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smndc1Q8BGT7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smndc1Q8BGT7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smndc1Q8BGT7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smndc1Q8BGT7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smndc1Q8BGT7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smndc1Q8BGT7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smndc1Q8BGT7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smndc1Q8BGT7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Smndc1Q8BGT7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
Smndc1Q8BGT7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smndc1Q8BGT7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.03■□□□□ 0.96
Smndc1Q8BGT7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smndc1Q8BGT7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smndc1Q8BGT7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smndc1Q8BGT7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smndc1Q8BGT7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.01■□□□□ 0.95
Smndc1Q8BGT7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smndc1Q8BGT7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smndc1Q8BGT7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smndc1Q8BGT7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smndc1Q8BGT7 Particl-201ENSMUST00000205370 1560 ntBASIC20.98■□□□□ 0.95
Smndc1Q8BGT7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smndc1Q8BGT7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smndc1Q8BGT7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smndc1Q8BGT7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smndc1Q8BGT7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smndc1Q8BGT7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smndc1Q8BGT7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smndc1Q8BGT7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smndc1Q8BGT7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.95■□□□□ 0.94
Smndc1Q8BGT7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smndc1Q8BGT7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smndc1Q8BGT7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Smndc1Q8BGT7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smndc1Q8BGT7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Smndc1Q8BGT7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Smndc1Q8BGT7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smndc1Q8BGT7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smndc1Q8BGT7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smndc1Q8BGT7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smndc1Q8BGT7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smndc1Q8BGT7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smndc1Q8BGT7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.93■□□□□ 0.94
Smndc1Q8BGT7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smndc1Q8BGT7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smndc1Q8BGT7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smndc1Q8BGT7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smndc1Q8BGT7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms