Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChrneP20782 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChrneP20782 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
ChrneP20782 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChrneP20782 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ChrneP20782 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ChrneP20782 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ChrneP20782 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.64■□□□□ 0.89
ChrneP20782 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChrneP20782 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChrneP20782 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChrneP20782 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.64■□□□□ 0.89
ChrneP20782 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChrneP20782 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.63■□□□□ 0.89
ChrneP20782 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChrneP20782 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ChrneP20782 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ChrneP20782 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ChrneP20782 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.62■□□□□ 0.89
ChrneP20782 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ChrneP20782 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
ChrneP20782 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
ChrneP20782 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ChrneP20782 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ChrneP20782 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ChrneP20782 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
ChrneP20782 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChrneP20782 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChrneP20782 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChrneP20782 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ChrneP20782 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ChrneP20782 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChrneP20782 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ChrneP20782 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ChrneP20782 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChrneP20782 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChrneP20782 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ChrneP20782 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.59■□□□□ 0.89
ChrneP20782 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ChrneP20782 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ChrneP20782 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ChrneP20782 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.58■□□□□ 0.89
ChrneP20782 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ChrneP20782 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.58■□□□□ 0.89
ChrneP20782 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ChrneP20782 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ChrneP20782 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ChrneP20782 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ChrneP20782 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
ChrneP20782 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ChrneP20782 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ChrneP20782 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ChrneP20782 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.57■□□□□ 0.88
ChrneP20782 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ChrneP20782 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ChrneP20782 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ChrneP20782 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.57■□□□□ 0.88
ChrneP20782 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChrneP20782 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ChrneP20782 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ChrneP20782 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.56■□□□□ 0.88
ChrneP20782 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.55■□□□□ 0.88
ChrneP20782 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChrneP20782 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ChrneP20782 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ChrneP20782 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChrneP20782 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ChrneP20782 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChrneP20782 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ChrneP20782 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChrneP20782 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ChrneP20782 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.54■□□□□ 0.88
ChrneP20782 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChrneP20782 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChrneP20782 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ChrneP20782 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ChrneP20782 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ChrneP20782 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChrneP20782 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChrneP20782 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ChrneP20782 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChrneP20782 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ChrneP20782 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ChrneP20782 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ChrneP20782 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ChrneP20782 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ChrneP20782 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ChrneP20782 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ChrneP20782 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
ChrneP20782 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ChrneP20782 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ChrneP20782 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ChrneP20782 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms