Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-4A0A140T8Q4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-4A0A140T8Q4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-4A0A140T8Q4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Igkv3-4A0A140T8Q4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-4A0A140T8Q4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-4A0A140T8Q4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-4A0A140T8Q4 Gm6277-202ENSMUST00000224036 2779 ntBASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Gm30023-201ENSMUST00000197970 889 ntBASIC13.71□□□□□ -0.21
Igkv3-4A0A140T8Q4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv3-4A0A140T8Q4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-4A0A140T8Q4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Gm6934-201ENSMUST00000194780 1905 ntBASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Dmtn-209ENSMUST00000228295 2572 ntBASIC13.69□□□□□ -0.22
Igkv3-4A0A140T8Q4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Igkv3-4A0A140T8Q4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv3-4A0A140T8Q4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv3-4A0A140T8Q4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv3-4A0A140T8Q4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv3-4A0A140T8Q4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv3-4A0A140T8Q4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv3-4A0A140T8Q4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Igkv3-4A0A140T8Q4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv3-4A0A140T8Q4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv3-4A0A140T8Q4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv3-4A0A140T8Q4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Igkv3-4A0A140T8Q4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv3-4A0A140T8Q4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms