Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.24■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.22■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.19■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.16■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.15■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.14■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms