Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-4A0A0G2JG37 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav9d-4A0A0G2JG37 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-4A0A0G2JG37 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.98□□□□□ -0.01
Trav9d-4A0A0G2JG37 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-4A0A0G2JG37 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-4A0A0G2JG37 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-4A0A0G2JG37 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav9d-4A0A0G2JG37 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Trav9d-4A0A0G2JG37 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-4A0A0G2JG37 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.96□□□□□ -0.02
Trav9d-4A0A0G2JG37 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-4A0A0G2JG37 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav9d-4A0A0G2JG37 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-4A0A0G2JG37 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-4A0A0G2JG37 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-4A0A0G2JG37 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-4A0A0G2JG37 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-4A0A0G2JG37 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-4A0A0G2JG37 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav9d-4A0A0G2JG37 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav9d-4A0A0G2JG37 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav9d-4A0A0G2JG37 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-4A0A0G2JG37 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trav9d-4A0A0G2JG37 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-4A0A0G2JG37 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-4A0A0G2JG37 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-4A0A0G2JG37 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-4A0A0G2JG37 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-4A0A0G2JG37 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-4A0A0G2JG37 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9d-4A0A0G2JG37 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-4A0A0G2JG37 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Trav9d-4A0A0G2JG37 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 124.2 ms