Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn9Q9Z0S7 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.24■□□□□ 0.99
Cldn9Q9Z0S7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn9Q9Z0S7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn9Q9Z0S7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cldn9Q9Z0S7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn9Q9Z0S7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn9Q9Z0S7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn9Q9Z0S7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cldn9Q9Z0S7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cldn9Q9Z0S7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn9Q9Z0S7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn9Q9Z0S7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn9Q9Z0S7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn9Q9Z0S7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cldn9Q9Z0S7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.21■□□□□ 0.99
Cldn9Q9Z0S7 Scarna2-201ENSMUST00000157560 414 ntBASIC21.21■□□□□ 0.99
Cldn9Q9Z0S7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn9Q9Z0S7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cldn9Q9Z0S7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn9Q9Z0S7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn9Q9Z0S7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Cldn9Q9Z0S7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn9Q9Z0S7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cldn9Q9Z0S7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn9Q9Z0S7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn9Q9Z0S7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn9Q9Z0S7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn9Q9Z0S7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn9Q9Z0S7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.19■□□□□ 0.98
Cldn9Q9Z0S7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cldn9Q9Z0S7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cldn9Q9Z0S7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 Gm16437-201ENSMUST00000025669 507 ntBASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn9Q9Z0S7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn9Q9Z0S7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn9Q9Z0S7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.16■□□□□ 0.98
Cldn9Q9Z0S7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Cldn9Q9Z0S7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn9Q9Z0S7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Cldn9Q9Z0S7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn9Q9Z0S7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cldn9Q9Z0S7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cldn9Q9Z0S7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cldn9Q9Z0S7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.14■□□□□ 0.97
Cldn9Q9Z0S7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn9Q9Z0S7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cldn9Q9Z0S7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cldn9Q9Z0S7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn9Q9Z0S7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn9Q9Z0S7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.12■□□□□ 0.97
Cldn9Q9Z0S7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn9Q9Z0S7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cldn9Q9Z0S7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms