Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cir1Q9DA19 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cir1Q9DA19 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.03■□□□□ 0.64
Cir1Q9DA19 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cir1Q9DA19 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.02■□□□□ 0.64
Cir1Q9DA19 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cir1Q9DA19 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cir1Q9DA19 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cir1Q9DA19 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cir1Q9DA19 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cir1Q9DA19 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.01■□□□□ 0.63
Cir1Q9DA19 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cir1Q9DA19 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.01■□□□□ 0.63
Cir1Q9DA19 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cir1Q9DA19 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cir1Q9DA19 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.01■□□□□ 0.63
Cir1Q9DA19 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cir1Q9DA19 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cir1Q9DA19 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cir1Q9DA19 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cir1Q9DA19 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cir1Q9DA19 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cir1Q9DA19 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cir1Q9DA19 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cir1Q9DA19 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.98■□□□□ 0.63
Cir1Q9DA19 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cir1Q9DA19 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cir1Q9DA19 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cir1Q9DA19 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cir1Q9DA19 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cir1Q9DA19 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cir1Q9DA19 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cir1Q9DA19 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cir1Q9DA19 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Cir1Q9DA19 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cir1Q9DA19 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cir1Q9DA19 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cir1Q9DA19 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.95■□□□□ 0.62
Cir1Q9DA19 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cir1Q9DA19 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.94■□□□□ 0.62
Cir1Q9DA19 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.94■□□□□ 0.62
Cir1Q9DA19 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cir1Q9DA19 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cir1Q9DA19 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cir1Q9DA19 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cir1Q9DA19 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cir1Q9DA19 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cir1Q9DA19 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cir1Q9DA19 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cir1Q9DA19 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cir1Q9DA19 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cir1Q9DA19 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Cir1Q9DA19 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Cir1Q9DA19 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cir1Q9DA19 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cir1Q9DA19 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cir1Q9DA19 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Cir1Q9DA19 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.91■□□□□ 0.62
Cir1Q9DA19 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cir1Q9DA19 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cir1Q9DA19 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.9■□□□□ 0.62
Cir1Q9DA19 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Cir1Q9DA19 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cir1Q9DA19 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.89■□□□□ 0.61
Cir1Q9DA19 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cir1Q9DA19 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cir1Q9DA19 Gm11175-201ENSMUST00000116172 543 ntBASIC18.88■□□□□ 0.61
Cir1Q9DA19 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.88■□□□□ 0.61
Cir1Q9DA19 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cir1Q9DA19 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cir1Q9DA19 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cir1Q9DA19 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cir1Q9DA19 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cir1Q9DA19 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cir1Q9DA19 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cir1Q9DA19 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.86■□□□□ 0.61
Cir1Q9DA19 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cir1Q9DA19 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cir1Q9DA19 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms