Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pdlim2Q8R1G6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pdlim2Q8R1G6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pdlim2Q8R1G6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pdlim2Q8R1G6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.81■■□□□ 1.72
Pdlim2Q8R1G6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Pdlim2Q8R1G6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pdlim2Q8R1G6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pdlim2Q8R1G6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Pdlim2Q8R1G6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Pdlim2Q8R1G6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pdlim2Q8R1G6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Pdlim2Q8R1G6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Pdlim2Q8R1G6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pdlim2Q8R1G6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pdlim2Q8R1G6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pdlim2Q8R1G6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pdlim2Q8R1G6 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.76■■□□□ 1.72
Pdlim2Q8R1G6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pdlim2Q8R1G6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pdlim2Q8R1G6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pdlim2Q8R1G6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.76■■□□□ 1.71
Pdlim2Q8R1G6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pdlim2Q8R1G6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.75■■□□□ 1.71
Pdlim2Q8R1G6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pdlim2Q8R1G6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pdlim2Q8R1G6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pdlim2Q8R1G6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pdlim2Q8R1G6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC25.74■■□□□ 1.71
Pdlim2Q8R1G6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pdlim2Q8R1G6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.73■■□□□ 1.71
Pdlim2Q8R1G6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pdlim2Q8R1G6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pdlim2Q8R1G6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.71■■□□□ 1.71
Pdlim2Q8R1G6 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.7■■□□□ 1.7
Pdlim2Q8R1G6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pdlim2Q8R1G6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Pdlim2Q8R1G6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pdlim2Q8R1G6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pdlim2Q8R1G6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.69■■□□□ 1.7
Pdlim2Q8R1G6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pdlim2Q8R1G6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pdlim2Q8R1G6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pdlim2Q8R1G6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pdlim2Q8R1G6 Iqck-206ENSMUST00000208658 2891 ntBASIC25.66■■□□□ 1.7
Pdlim2Q8R1G6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pdlim2Q8R1G6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Pdlim2Q8R1G6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
Pdlim2Q8R1G6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pdlim2Q8R1G6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pdlim2Q8R1G6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.65■■□□□ 1.7
Pdlim2Q8R1G6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pdlim2Q8R1G6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pdlim2Q8R1G6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pdlim2Q8R1G6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pdlim2Q8R1G6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Pdlim2Q8R1G6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pdlim2Q8R1G6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pdlim2Q8R1G6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pdlim2Q8R1G6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pdlim2Q8R1G6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pdlim2Q8R1G6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pdlim2Q8R1G6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pdlim2Q8R1G6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pdlim2Q8R1G6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Pdlim2Q8R1G6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pdlim2Q8R1G6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pdlim2Q8R1G6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pdlim2Q8R1G6 Gm34220-201ENSMUST00000223001 2709 ntBASIC25.59■■□□□ 1.69
Pdlim2Q8R1G6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Pdlim2Q8R1G6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pdlim2Q8R1G6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pdlim2Q8R1G6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pdlim2Q8R1G6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms