Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp28Q8CGV8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp28Q8CGV8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp28Q8CGV8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mmp28Q8CGV8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp28Q8CGV8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp28Q8CGV8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp28Q8CGV8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp28Q8CGV8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp28Q8CGV8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp28Q8CGV8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp28Q8CGV8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp28Q8CGV8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp28Q8CGV8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp28Q8CGV8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Mmp28Q8CGV8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mmp28Q8CGV8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mmp28Q8CGV8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Mmp28Q8CGV8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mmp28Q8CGV8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp28Q8CGV8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp28Q8CGV8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp28Q8CGV8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms