Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Vrk1Q80X41 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vrk1Q80X41 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.14■□□□□ 0.97
Vrk1Q80X41 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vrk1Q80X41 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Vrk1Q80X41 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.13■□□□□ 0.97
Vrk1Q80X41 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Vrk1Q80X41 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.13■□□□□ 0.97
Vrk1Q80X41 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vrk1Q80X41 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.12■□□□□ 0.97
Vrk1Q80X41 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Vrk1Q80X41 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vrk1Q80X41 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vrk1Q80X41 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vrk1Q80X41 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Vrk1Q80X41 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vrk1Q80X41 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Vrk1Q80X41 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vrk1Q80X41 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vrk1Q80X41 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.1■□□□□ 0.97
Vrk1Q80X41 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vrk1Q80X41 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vrk1Q80X41 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Vrk1Q80X41 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vrk1Q80X41 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vrk1Q80X41 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Vrk1Q80X41 Gm45102-201ENSMUST00000207427 857 ntBASIC21.09■□□□□ 0.97
Vrk1Q80X41 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vrk1Q80X41 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vrk1Q80X41 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Vrk1Q80X41 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Vrk1Q80X41 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.07■□□□□ 0.96
Vrk1Q80X41 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vrk1Q80X41 Gm15039-201ENSMUST00000118914 875 ntBASIC21.07■□□□□ 0.96
Vrk1Q80X41 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vrk1Q80X41 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.07■□□□□ 0.96
Vrk1Q80X41 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Vrk1Q80X41 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vrk1Q80X41 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.07■□□□□ 0.96
Vrk1Q80X41 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vrk1Q80X41 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vrk1Q80X41 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vrk1Q80X41 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vrk1Q80X41 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.06■□□□□ 0.96
Vrk1Q80X41 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.06■□□□□ 0.96
Vrk1Q80X41 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Vrk1Q80X41 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vrk1Q80X41 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vrk1Q80X41 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vrk1Q80X41 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vrk1Q80X41 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vrk1Q80X41 Gm14117-201ENSMUST00000122417 843 ntBASIC21.03■□□□□ 0.96
Vrk1Q80X41 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vrk1Q80X41 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vrk1Q80X41 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vrk1Q80X41 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vrk1Q80X41 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vrk1Q80X41 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vrk1Q80X41 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vrk1Q80X41 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.02■□□□□ 0.96
Vrk1Q80X41 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vrk1Q80X41 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vrk1Q80X41 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Vrk1Q80X41 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Vrk1Q80X41 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vrk1Q80X41 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Vrk1Q80X41 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vrk1Q80X41 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vrk1Q80X41 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vrk1Q80X41 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vrk1Q80X41 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vrk1Q80X41 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vrk1Q80X41 Gm9959-201ENSMUST00000068277 390 ntBASIC20.99■□□□□ 0.95
Vrk1Q80X41 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vrk1Q80X41 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vrk1Q80X41 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Vrk1Q80X41 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.98■□□□□ 0.95
Vrk1Q80X41 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.98■□□□□ 0.95
Vrk1Q80X41 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Vrk1Q80X41 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vrk1Q80X41 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vrk1Q80X41 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms