Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf40bQ80W14 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Prpf40bQ80W14 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf40bQ80W14 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf40bQ80W14 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.51■■□□□ 1.67
Prpf40bQ80W14 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Prpf40bQ80W14 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf40bQ80W14 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf40bQ80W14 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.5■■□□□ 1.67
Prpf40bQ80W14 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.5■■□□□ 1.67
Prpf40bQ80W14 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.5■■□□□ 1.67
Prpf40bQ80W14 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Prpf40bQ80W14 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf40bQ80W14 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Prpf40bQ80W14 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf40bQ80W14 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf40bQ80W14 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf40bQ80W14 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf40bQ80W14 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.48■■□□□ 1.67
Prpf40bQ80W14 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.48■■□□□ 1.67
Prpf40bQ80W14 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf40bQ80W14 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Prpf40bQ80W14 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Prpf40bQ80W14 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Prpf40bQ80W14 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Prpf40bQ80W14 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf40bQ80W14 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Prpf40bQ80W14 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf40bQ80W14 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.45■■□□□ 1.66
Prpf40bQ80W14 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf40bQ80W14 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf40bQ80W14 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf40bQ80W14 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf40bQ80W14 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf40bQ80W14 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf40bQ80W14 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf40bQ80W14 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf40bQ80W14 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf40bQ80W14 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.42■■□□□ 1.66
Prpf40bQ80W14 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf40bQ80W14 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Prpf40bQ80W14 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Prpf40bQ80W14 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Prpf40bQ80W14 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Prpf40bQ80W14 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Prpf40bQ80W14 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Prpf40bQ80W14 Serp2-204ENSMUST00000228055 705 ntBASIC25.4■■□□□ 1.66
Prpf40bQ80W14 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Prpf40bQ80W14 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Prpf40bQ80W14 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Prpf40bQ80W14 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Prpf40bQ80W14 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Prpf40bQ80W14 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Prpf40bQ80W14 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Prpf40bQ80W14 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf40bQ80W14 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf40bQ80W14 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf40bQ80W14 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf40bQ80W14 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.37■■□□□ 1.65
Prpf40bQ80W14 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Prpf40bQ80W14 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.37■■□□□ 1.65
Prpf40bQ80W14 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Prpf40bQ80W14 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Prpf40bQ80W14 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.37■■□□□ 1.65
Prpf40bQ80W14 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Prpf40bQ80W14 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Prpf40bQ80W14 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Prpf40bQ80W14 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.35■■□□□ 1.65
Prpf40bQ80W14 Etf1-202ENSMUST00000180351 108 ntBASIC25.35■■□□□ 1.65
Prpf40bQ80W14 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Prpf40bQ80W14 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Prpf40bQ80W14 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.34■■□□□ 1.65
Prpf40bQ80W14 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.34■■□□□ 1.65
Prpf40bQ80W14 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Prpf40bQ80W14 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.34■■□□□ 1.65
Prpf40bQ80W14 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Prpf40bQ80W14 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Prpf40bQ80W14 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.33■■□□□ 1.65
Prpf40bQ80W14 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Prpf40bQ80W14 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Prpf40bQ80W14 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.32■■□□□ 1.64
Prpf40bQ80W14 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Prpf40bQ80W14 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Prpf40bQ80W14 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Prpf40bQ80W14 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Prpf40bQ80W14 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Prpf40bQ80W14 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.3■■□□□ 1.64
Prpf40bQ80W14 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Prpf40bQ80W14 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Prpf40bQ80W14 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Prpf40bQ80W14 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Prpf40bQ80W14 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Prpf40bQ80W14 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms