Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Rpap1Q80TE0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Rpap1Q80TE0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
Rpap1Q80TE0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Rpap1Q80TE0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
Rpap1Q80TE0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
Rpap1Q80TE0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Rpap1Q80TE0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
Rpap1Q80TE0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC35.27■■■■□ 3.24
Rpap1Q80TE0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC35.27■■■■□ 3.24
Rpap1Q80TE0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC35.27■■■■□ 3.24
Rpap1Q80TE0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Rpap1Q80TE0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
Rpap1Q80TE0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC35.26■■■■□ 3.24
Rpap1Q80TE0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC35.26■■■■□ 3.24
Rpap1Q80TE0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Rpap1Q80TE0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Rpap1Q80TE0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Rpap1Q80TE0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Rpap1Q80TE0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC35.23■■■■□ 3.23
Rpap1Q80TE0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Rpap1Q80TE0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC35.23■■■■□ 3.23
Rpap1Q80TE0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Rpap1Q80TE0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Rpap1Q80TE0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC35.22■■■■□ 3.23
Rpap1Q80TE0 Gm5131-201ENSMUST00000212776 1238 ntBASIC35.22■■■■□ 3.23
Rpap1Q80TE0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Rpap1Q80TE0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC35.22■■■■□ 3.23
Rpap1Q80TE0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rpap1Q80TE0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rpap1Q80TE0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC35.21■■■■□ 3.23
Rpap1Q80TE0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
Rpap1Q80TE0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rpap1Q80TE0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rpap1Q80TE0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC35.2■■■■□ 3.23
Rpap1Q80TE0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC35.2■■■■□ 3.23
Rpap1Q80TE0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Rpap1Q80TE0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Rpap1Q80TE0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC35.16■■■■□ 3.22
Rpap1Q80TE0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC35.16■■■■□ 3.22
Rpap1Q80TE0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Rpap1Q80TE0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Rpap1Q80TE0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Rpap1Q80TE0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC35.15■■■■□ 3.22
Rpap1Q80TE0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Rpap1Q80TE0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC35.14■■■■□ 3.22
Rpap1Q80TE0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC35.14■■■■□ 3.22
Rpap1Q80TE0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Rpap1Q80TE0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rpap1Q80TE0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rpap1Q80TE0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC35.11■■■■□ 3.21
Rpap1Q80TE0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC35.11■■■■□ 3.21
Rpap1Q80TE0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rpap1Q80TE0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC35.1■■■■□ 3.21
Rpap1Q80TE0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC35.1■■■■□ 3.21
Rpap1Q80TE0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Rpap1Q80TE0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC35.09■■■■□ 3.21
Rpap1Q80TE0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Rpap1Q80TE0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC35.09■■■■□ 3.21
Rpap1Q80TE0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC35.08■■■■□ 3.21
Rpap1Q80TE0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Rpap1Q80TE0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC35.08■■■■□ 3.21
Rpap1Q80TE0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
Rpap1Q80TE0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC35.07■■■■□ 3.21
Rpap1Q80TE0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC35.07■■■■□ 3.21
Rpap1Q80TE0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Rpap1Q80TE0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rpap1Q80TE0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
Rpap1Q80TE0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rpap1Q80TE0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC35.06■■■■□ 3.2
Rpap1Q80TE0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Rpap1Q80TE0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
Rpap1Q80TE0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Rpap1Q80TE0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Rpap1Q80TE0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC35.04■■■■□ 3.2
Rpap1Q80TE0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC35.04■■■■□ 3.2
Rpap1Q80TE0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
Rpap1Q80TE0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC35.03■■■■□ 3.2
Rpap1Q80TE0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rpap1Q80TE0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Rpap1Q80TE0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rpap1Q80TE0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rpap1Q80TE0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC35.02■■■■□ 3.2
Rpap1Q80TE0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
Rpap1Q80TE0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC35.02■■■■□ 3.2
Rpap1Q80TE0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
Rpap1Q80TE0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
Rpap1Q80TE0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Rpap1Q80TE0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Rpap1Q80TE0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Rpap1Q80TE0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC35■■■■□ 3.19
Rpap1Q80TE0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC35■■■■□ 3.19
Rpap1Q80TE0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Rpap1Q80TE0 Gm16464-201ENSMUST00000117815 1095 ntBASIC34.99■■■■□ 3.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms