Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ddx55Q6ZPL9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Ddx55Q6ZPL9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.78■■□□□ 1.72
Ddx55Q6ZPL9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx55Q6ZPL9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.77■■□□□ 1.72
Ddx55Q6ZPL9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx55Q6ZPL9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx55Q6ZPL9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx55Q6ZPL9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx55Q6ZPL9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx55Q6ZPL9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx55Q6ZPL9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx55Q6ZPL9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.75■■□□□ 1.71
Ddx55Q6ZPL9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx55Q6ZPL9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Ddx55Q6ZPL9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx55Q6ZPL9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx55Q6ZPL9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx55Q6ZPL9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Ddx55Q6ZPL9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Ddx55Q6ZPL9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx55Q6ZPL9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx55Q6ZPL9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx55Q6ZPL9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx55Q6ZPL9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx55Q6ZPL9 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.73■■□□□ 1.71
Ddx55Q6ZPL9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ddx55Q6ZPL9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.72■■□□□ 1.71
Ddx55Q6ZPL9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx55Q6ZPL9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx55Q6ZPL9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.72■■□□□ 1.71
Ddx55Q6ZPL9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ddx55Q6ZPL9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.71■■□□□ 1.71
Ddx55Q6ZPL9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.7■■□□□ 1.71
Ddx55Q6ZPL9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.7■■□□□ 1.7
Ddx55Q6ZPL9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ddx55Q6ZPL9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ddx55Q6ZPL9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.7■■□□□ 1.7
Ddx55Q6ZPL9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.69■■□□□ 1.7
Ddx55Q6ZPL9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx55Q6ZPL9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.69■■□□□ 1.7
Ddx55Q6ZPL9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.69■■□□□ 1.7
Ddx55Q6ZPL9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Ddx55Q6ZPL9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ddx55Q6ZPL9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx55Q6ZPL9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx55Q6ZPL9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ddx55Q6ZPL9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Ddx55Q6ZPL9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.67■■□□□ 1.7
Ddx55Q6ZPL9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ddx55Q6ZPL9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.67■■□□□ 1.7
Ddx55Q6ZPL9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ddx55Q6ZPL9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ddx55Q6ZPL9 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.65■■□□□ 1.7
Ddx55Q6ZPL9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.65■■□□□ 1.7
Ddx55Q6ZPL9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Ddx55Q6ZPL9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ddx55Q6ZPL9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.64■■□□□ 1.7
Ddx55Q6ZPL9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ddx55Q6ZPL9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.64■■□□□ 1.69
Ddx55Q6ZPL9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ddx55Q6ZPL9 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.63■■□□□ 1.69
Ddx55Q6ZPL9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx55Q6ZPL9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx55Q6ZPL9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx55Q6ZPL9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ddx55Q6ZPL9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx55Q6ZPL9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ddx55Q6ZPL9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ddx55Q6ZPL9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ddx55Q6ZPL9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ddx55Q6ZPL9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.6■■□□□ 1.69
Ddx55Q6ZPL9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ddx55Q6ZPL9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ddx55Q6ZPL9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.59■■□□□ 1.69
Ddx55Q6ZPL9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.58■■□□□ 1.69
Ddx55Q6ZPL9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ddx55Q6ZPL9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx55Q6ZPL9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.57■■□□□ 1.68
Ddx55Q6ZPL9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.57■■□□□ 1.68
Ddx55Q6ZPL9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ddx55Q6ZPL9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Ddx55Q6ZPL9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx55Q6ZPL9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx55Q6ZPL9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
Ddx55Q6ZPL9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.56■■□□□ 1.68
Ddx55Q6ZPL9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ddx55Q6ZPL9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx55Q6ZPL9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.55■■□□□ 1.68
Ddx55Q6ZPL9 Gm7417-201ENSMUST00000192950 473 ntBASIC25.55■■□□□ 1.68
Ddx55Q6ZPL9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.55■■□□□ 1.68
Ddx55Q6ZPL9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ddx55Q6ZPL9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ddx55Q6ZPL9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms