Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom1Q5SX79 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shroom1Q5SX79 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shroom1Q5SX79 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shroom1Q5SX79 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Shroom1Q5SX79 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Shroom1Q5SX79 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Shroom1Q5SX79 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.54■■□□□ 1.36
Shroom1Q5SX79 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Shroom1Q5SX79 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shroom1Q5SX79 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.53■■□□□ 1.36
Shroom1Q5SX79 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shroom1Q5SX79 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shroom1Q5SX79 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Shroom1Q5SX79 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.52■■□□□ 1.36
Shroom1Q5SX79 Gm45444-201ENSMUST00000211394 898 ntBASIC23.52■■□□□ 1.36
Shroom1Q5SX79 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Shroom1Q5SX79 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.52■■□□□ 1.36
Shroom1Q5SX79 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Shroom1Q5SX79 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shroom1Q5SX79 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Shroom1Q5SX79 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Shroom1Q5SX79 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Shroom1Q5SX79 Gm13238-201ENSMUST00000117655 780 ntBASIC23.49■■□□□ 1.35
Shroom1Q5SX79 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.49■■□□□ 1.35
Shroom1Q5SX79 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.49■■□□□ 1.35
Shroom1Q5SX79 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Shroom1Q5SX79 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Shroom1Q5SX79 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.48■■□□□ 1.35
Shroom1Q5SX79 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Shroom1Q5SX79 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Shroom1Q5SX79 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Shroom1Q5SX79 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Shroom1Q5SX79 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.47■■□□□ 1.35
Shroom1Q5SX79 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Shroom1Q5SX79 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Shroom1Q5SX79 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.46■■□□□ 1.35
Shroom1Q5SX79 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Shroom1Q5SX79 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.46■■□□□ 1.35
Shroom1Q5SX79 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Shroom1Q5SX79 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Shroom1Q5SX79 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Shroom1Q5SX79 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
Shroom1Q5SX79 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom1Q5SX79 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom1Q5SX79 Gm22567-201ENSMUST00000175542 342 ntBASIC23.43■■□□□ 1.34
Shroom1Q5SX79 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Shroom1Q5SX79 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Shroom1Q5SX79 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.42■■□□□ 1.34
Shroom1Q5SX79 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom1Q5SX79 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shroom1Q5SX79 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Shroom1Q5SX79 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom1Q5SX79 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom1Q5SX79 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom1Q5SX79 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom1Q5SX79 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom1Q5SX79 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom1Q5SX79 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.4■■□□□ 1.34
Shroom1Q5SX79 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.4■■□□□ 1.34
Shroom1Q5SX79 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom1Q5SX79 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Shroom1Q5SX79 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom1Q5SX79 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom1Q5SX79 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.39■■□□□ 1.34
Shroom1Q5SX79 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shroom1Q5SX79 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Shroom1Q5SX79 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Shroom1Q5SX79 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom1Q5SX79 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms