Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp25Q3U435 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp25Q3U435 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp25Q3U435 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp25Q3U435 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.85■□□□□ 0.93
Mmp25Q3U435 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Mmp25Q3U435 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp25Q3U435 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp25Q3U435 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Mmp25Q3U435 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp25Q3U435 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp25Q3U435 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Mmp25Q3U435 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.83■□□□□ 0.93
Mmp25Q3U435 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp25Q3U435 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Mmp25Q3U435 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp25Q3U435 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp25Q3U435 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp25Q3U435 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp25Q3U435 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp25Q3U435 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp25Q3U435 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mmp25Q3U435 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp25Q3U435 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp25Q3U435 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp25Q3U435 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.81■□□□□ 0.92
Mmp25Q3U435 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp25Q3U435 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp25Q3U435 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp25Q3U435 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp25Q3U435 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Mmp25Q3U435 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp25Q3U435 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Mmp25Q3U435 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp25Q3U435 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp25Q3U435 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp25Q3U435 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp25Q3U435 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp25Q3U435 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Mmp25Q3U435 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp25Q3U435 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Mmp25Q3U435 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.78■□□□□ 0.92
Mmp25Q3U435 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Mmp25Q3U435 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp25Q3U435 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.78■□□□□ 0.92
Mmp25Q3U435 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp25Q3U435 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp25Q3U435 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Mmp25Q3U435 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.76■□□□□ 0.91
Mmp25Q3U435 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp25Q3U435 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mmp25Q3U435 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.75■□□□□ 0.91
Mmp25Q3U435 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp25Q3U435 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp25Q3U435 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.74■□□□□ 0.91
Mmp25Q3U435 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp25Q3U435 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp25Q3U435 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp25Q3U435 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp25Q3U435 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp25Q3U435 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp25Q3U435 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp25Q3U435 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mmp25Q3U435 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp25Q3U435 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp25Q3U435 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp25Q3U435 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.72■□□□□ 0.91
Mmp25Q3U435 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp25Q3U435 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp25Q3U435 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp25Q3U435 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp25Q3U435 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms