Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc4Q3TCX3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdc4Q3TCX3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Khdc4Q3TCX3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.9■□□□□ 0.94
Khdc4Q3TCX3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Khdc4Q3TCX3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Khdc4Q3TCX3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.89■□□□□ 0.94
Khdc4Q3TCX3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.89■□□□□ 0.93
Khdc4Q3TCX3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Khdc4Q3TCX3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Khdc4Q3TCX3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Khdc4Q3TCX3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Khdc4Q3TCX3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc4Q3TCX3 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.88■□□□□ 0.93
Khdc4Q3TCX3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Khdc4Q3TCX3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Khdc4Q3TCX3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc4Q3TCX3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Khdc4Q3TCX3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Khdc4Q3TCX3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Khdc4Q3TCX3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc4Q3TCX3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Khdc4Q3TCX3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Khdc4Q3TCX3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc4Q3TCX3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc4Q3TCX3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc4Q3TCX3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc4Q3TCX3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc4Q3TCX3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc4Q3TCX3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Khdc4Q3TCX3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc4Q3TCX3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Khdc4Q3TCX3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc4Q3TCX3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc4Q3TCX3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc4Q3TCX3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.83■□□□□ 0.93
Khdc4Q3TCX3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc4Q3TCX3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Khdc4Q3TCX3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdc4Q3TCX3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdc4Q3TCX3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdc4Q3TCX3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Khdc4Q3TCX3 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.82■□□□□ 0.92
Khdc4Q3TCX3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdc4Q3TCX3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Khdc4Q3TCX3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc4Q3TCX3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc4Q3TCX3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc4Q3TCX3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc4Q3TCX3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc4Q3TCX3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc4Q3TCX3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Khdc4Q3TCX3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc4Q3TCX3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc4Q3TCX3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc4Q3TCX3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc4Q3TCX3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc4Q3TCX3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc4Q3TCX3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Khdc4Q3TCX3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.77■□□□□ 0.92
Khdc4Q3TCX3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Khdc4Q3TCX3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Khdc4Q3TCX3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc4Q3TCX3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc4Q3TCX3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.75■□□□□ 0.91
Khdc4Q3TCX3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.75■□□□□ 0.91
Khdc4Q3TCX3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Khdc4Q3TCX3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc4Q3TCX3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc4Q3TCX3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms