Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC30.83■■■□□ 2.53
Nphp4P59240 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Nphp4P59240 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC30.83■■■□□ 2.53
Nphp4P59240 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Nphp4P59240 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Nphp4P59240 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Nphp4P59240 Gm42699-201ENSMUST00000198104 1657 ntBASIC30.81■■■□□ 2.52
Nphp4P59240 Gm15546-201ENSMUST00000122095 826 ntBASIC30.81■■■□□ 2.52
Nphp4P59240 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Nphp4P59240 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Nphp4P59240 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Nphp4P59240 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Nphp4P59240 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC30.79■■■□□ 2.52
Nphp4P59240 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Nphp4P59240 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Nphp4P59240 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
Nphp4P59240 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nphp4P59240 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC30.77■■■□□ 2.52
Nphp4P59240 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nphp4P59240 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Nphp4P59240 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Nphp4P59240 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Nphp4P59240 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Nphp4P59240 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC30.75■■■□□ 2.51
Nphp4P59240 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Nphp4P59240 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC30.74■■■□□ 2.51
Nphp4P59240 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Nphp4P59240 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nphp4P59240 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nphp4P59240 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nphp4P59240 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nphp4P59240 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Nphp4P59240 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Nphp4P59240 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC30.72■■■□□ 2.51
Nphp4P59240 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nphp4P59240 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nphp4P59240 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Nphp4P59240 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.71■■■□□ 2.51
Nphp4P59240 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
Nphp4P59240 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Nphp4P59240 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nphp4P59240 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nphp4P59240 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
Nphp4P59240 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nphp4P59240 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Nphp4P59240 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Nphp4P59240 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Nphp4P59240 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC30.66■■■□□ 2.5
Nphp4P59240 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Nphp4P59240 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nphp4P59240 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nphp4P59240 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nphp4P59240 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nphp4P59240 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Nphp4P59240 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Nphp4P59240 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Nphp4P59240 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Nphp4P59240 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nphp4P59240 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nphp4P59240 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Nphp4P59240 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nphp4P59240 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nphp4P59240 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Nphp4P59240 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC30.62■■■□□ 2.49
Nphp4P59240 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC30.62■■■□□ 2.49
Nphp4P59240 AC153524.1-201ENSMUST00000220436 1935 ntBASIC30.61■■■□□ 2.49
Nphp4P59240 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Nphp4P59240 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Nphp4P59240 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30.6■■■□□ 2.49
Nphp4P59240 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Nphp4P59240 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Nphp4P59240 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Nphp4P59240 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Nphp4P59240 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Nphp4P59240 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Nphp4P59240 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Nphp4P59240 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC30.58■■■□□ 2.49
Nphp4P59240 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Nphp4P59240 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Nphp4P59240 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Nphp4P59240 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Nphp4P59240 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
Nphp4P59240 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Nphp4P59240 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Nphp4P59240 Gm15820-201ENSMUST00000201566 728 ntBASIC30.56■■■□□ 2.48
Nphp4P59240 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Nphp4P59240 AC117245.4-201ENSMUST00000217388 1646 ntBASIC30.56■■■□□ 2.48
Nphp4P59240 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Nphp4P59240 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
Nphp4P59240 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC30.56■■■□□ 2.48
Nphp4P59240 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Nphp4P59240 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Nphp4P59240 Gm22567-201ENSMUST00000175542 342 ntBASIC30.55■■■□□ 2.48
Nphp4P59240 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Nphp4P59240 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Nphp4P59240 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Nphp4P59240 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Nphp4P59240 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Nphp4P59240 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
Nphp4P59240 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms