Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sox6P40645 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox6P40645 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox6P40645 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sox6P40645 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox6P40645 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox6P40645 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox6P40645 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sox6P40645 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.58■□□□□ 0.88
Sox6P40645 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.57■□□□□ 0.88
Sox6P40645 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sox6P40645 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox6P40645 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Sox6P40645 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.57■□□□□ 0.88
Sox6P40645 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox6P40645 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox6P40645 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.56■□□□□ 0.88
Sox6P40645 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox6P40645 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox6P40645 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sox6P40645 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox6P40645 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox6P40645 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sox6P40645 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox6P40645 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox6P40645 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sox6P40645 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sox6P40645 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.54■□□□□ 0.88
Sox6P40645 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.54■□□□□ 0.88
Sox6P40645 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox6P40645 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox6P40645 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.54■□□□□ 0.88
Sox6P40645 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sox6P40645 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 Mir3960-201ENSMUST00000198213 73 ntBASIC20.53■□□□□ 0.88
Sox6P40645 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.53■□□□□ 0.88
Sox6P40645 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sox6P40645 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sox6P40645 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox6P40645 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.52■□□□□ 0.88
Sox6P40645 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.52■□□□□ 0.88
Sox6P40645 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sox6P40645 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sox6P40645 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.52■□□□□ 0.88
Sox6P40645 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Sox6P40645 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sox6P40645 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sox6P40645 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox6P40645 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Sox6P40645 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sox6P40645 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox6P40645 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sox6P40645 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sox6P40645 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.51■□□□□ 0.87
Sox6P40645 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sox6P40645 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sox6P40645 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.51■□□□□ 0.87
Sox6P40645 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sox6P40645 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.5■□□□□ 0.87
Sox6P40645 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox6P40645 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.49■□□□□ 0.87
Sox6P40645 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox6P40645 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox6P40645 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sox6P40645 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox6P40645 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox6P40645 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sox6P40645 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox6P40645 Gm6311-201ENSMUST00000073790 878 ntBASIC20.48■□□□□ 0.87
Sox6P40645 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sox6P40645 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox6P40645 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox6P40645 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox6P40645 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.47■□□□□ 0.87
Sox6P40645 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox6P40645 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox6P40645 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox6P40645 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox6P40645 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.46■□□□□ 0.87
Sox6P40645 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox6P40645 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Sox6P40645 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sox6P40645 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sox6P40645 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.45■□□□□ 0.86
Sox6P40645 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.45■□□□□ 0.86
Sox6P40645 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sox6P40645 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox6P40645 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox6P40645 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms