Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 YHR020WYHR020W 2067 nt5.55□□□□□ -1.52
CUE1P38428 NMT1YLR195C 1368 nt5.55□□□□□ -1.52
CUE1P38428 MSN2YMR037C 2115 nt5.54□□□□□ -1.52
CUE1P38428 DOT1YDR440W 1749 nt5.54□□□□□ -1.52
CUE1P38428 RSA4YCR072C 1548 nt5.54□□□□□ -1.52
CUE1P38428 HXT17YNR072W 1695 nt5.54□□□□□ -1.52
CUE1P38428 RGD1YBR260C 2001 nt5.54□□□□□ -1.52
CUE1P38428 HIS1YER055C 894 nt5.54□□□□□ -1.52
CUE1P38428 CIS3YJL158C 684 nt5.54□□□□□ -1.52
CUE1P38428 CSC1YLR241W 2349 nt5.54□□□□□ -1.52
CUE1P38428 YPR204WYPR204W 3099 nt5.54□□□□□ -1.52
CUE1P38428 COX15YER141W 1461 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)BtG(GCC)B 71 nt5.53□□□□□ -1.52
CUE1P38428 SUF16tG(GCC)C 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)D1tG(GCC)D1 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)D2tG(GCC)D2 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)EtG(GCC)E 71 nt5.53□□□□□ -1.52
CUE1P38428 SUF20tG(GCC)F1 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)F2tG(GCC)F2 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)G1tG(GCC)G1 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)G2tG(GCC)G2 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)J1tG(GCC)J1 71 nt5.53□□□□□ -1.52
CUE1P38428 SUF23tG(GCC)J2 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)MtG(GCC)M 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)O1tG(GCC)O1 71 nt5.53□□□□□ -1.52
CUE1P38428 SUF17tG(GCC)O2 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)P1tG(GCC)P1 71 nt5.53□□□□□ -1.52
CUE1P38428 tG(GCC)P2tG(GCC)P2 71 nt5.53□□□□□ -1.52
CUE1P38428 HEM2YGL040C 1029 nt5.53□□□□□ -1.52
CUE1P38428 CDC11YJR076C 1248 nt5.53□□□□□ -1.52
CUE1P38428 YLL056CYLL056C 897 nt5.53□□□□□ -1.52
CUE1P38428 YPR076WYPR076W 375 nt5.53□□□□□ -1.52
CUE1P38428 ARG81YML099C 2643 nt5.53□□□□□ -1.52
CUE1P38428 GCN3YKR026C 918 nt5.52□□□□□ -1.53
CUE1P38428 SWD1YAR003W 1281 nt5.52□□□□□ -1.53
CUE1P38428 YBR113WYBR113W 483 nt5.52□□□□□ -1.53
CUE1P38428 HIS7YBR248C 1659 nt5.52□□□□□ -1.53
CUE1P38428 IMA5YJL216C 1746 nt5.51□□□□□ -1.53
CUE1P38428 COQ1YBR003W 1422 nt5.51□□□□□ -1.53
CUE1P38428 GPD1YDL022W 1176 nt5.51□□□□□ -1.53
CUE1P38428 AGX1YFL030W 1158 nt5.51□□□□□ -1.53
CUE1P38428 DID2YKR035W-A 615 nt5.51□□□□□ -1.53
CUE1P38428 YML6YML025C 861 nt5.51□□□□□ -1.53
CUE1P38428 TOS6YNL300W 309 nt5.51□□□□□ -1.53
CUE1P38428 TMA46YOR091W 1038 nt5.51□□□□□ -1.53
CUE1P38428 ASR1YPR093C 867 nt5.51□□□□□ -1.53
CUE1P38428 VHT1YGR065C 1782 nt5.51□□□□□ -1.53
CUE1P38428 PXL1YKR090W 2121 nt5.5□□□□□ -1.53
CUE1P38428 TPO3YPR156C 1869 nt5.5□□□□□ -1.53
CUE1P38428 HEM1YDR232W 1647 nt5.5□□□□□ -1.53
CUE1P38428 PPH21YDL134C 1110 nt5.5□□□□□ -1.53
CUE1P38428 HED1YDR014W-A 489 nt5.5□□□□□ -1.53
CUE1P38428 MRPL35YDR322W 1104 nt5.5□□□□□ -1.53
CUE1P38428 SUF5tG(CCC)O 72 nt5.5□□□□□ -1.53
CUE1P38428 LIA1YJR070C 978 nt5.5□□□□□ -1.53
CUE1P38428 OAC1YKL120W 975 nt5.5□□□□□ -1.53
CUE1P38428 PEX13YLR191W 1161 nt5.5□□□□□ -1.53
CUE1P38428 IRS4YKR019C 1848 nt5.5□□□□□ -1.53
CUE1P38428 HOC1YJR075W 1191 nt5.49□□□□□ -1.53
CUE1P38428 YKL018C-AYKL018C-A 300 nt5.49□□□□□ -1.53
CUE1P38428 MIA40YKL195W 1212 nt5.49□□□□□ -1.53
CUE1P38428 CRH1YGR189C 1524 nt5.48□□□□□ -1.53
CUE1P38428 RMD9YGL107C 1941 nt5.48□□□□□ -1.53
CUE1P38428 SES1YDR023W 1389 nt5.48□□□□□ -1.53
CUE1P38428 YKR032WYKR032W 315 nt5.48□□□□□ -1.53
CUE1P38428 MRPL23YOR150W 492 nt5.48□□□□□ -1.53
CUE1P38428 PPM2YOL141W 2088 nt5.47□□□□□ -1.53
CUE1P38428 MSS1YMR023C 1581 nt5.47□□□□□ -1.53
CUE1P38428 YDR415CYDR415C 1125 nt5.47□□□□□ -1.53
CUE1P38428 YJR107WYJR107W 987 nt5.47□□□□□ -1.53
CUE1P38428 COX5AYNL052W 462 nt5.47□□□□□ -1.53
CUE1P38428 MRPL19YNL185C 477 nt5.47□□□□□ -1.53
CUE1P38428 ADH5YBR145W 1056 nt5.47□□□□□ -1.53
CUE1P38428 YDR387CYDR387C 1668 nt5.47□□□□□ -1.53
CUE1P38428 TFC6YDR362C 2019 nt5.47□□□□□ -1.53
CUE1P38428 YML133CYML133C 4125 nt5.46□□□□□ -1.53
CUE1P38428 GUF1YLR289W 1938 nt5.46□□□□□ -1.53
CUE1P38428 FMP40YPL222W 2067 nt5.46□□□□□ -1.53
CUE1P38428 NTE1YML059C 5040 nt5.46□□□□□ -1.54
CUE1P38428 YPT1YFL038C 621 nt5.46□□□□□ -1.54
CUE1P38428 DUS4YLR405W 1104 nt5.46□□□□□ -1.54
CUE1P38428 ALT2YDR111C 1524 nt5.46□□□□□ -1.54
CUE1P38428 PMT3YOR321W 2262 nt5.45□□□□□ -1.54
CUE1P38428 EDE1YBL047C 4146 nt5.45□□□□□ -1.54
CUE1P38428 YNL092WYNL092W 1203 nt5.45□□□□□ -1.54
CUE1P38428 HAS1YMR290C 1518 nt5.44□□□□□ -1.54
CUE1P38428 COX9YDL067C 180 nt5.44□□□□□ -1.54
CUE1P38428 YLR312CYLR312C 1197 nt5.44□□□□□ -1.54
CUE1P38428 LSC1YOR142W 990 nt5.44□□□□□ -1.54
CUE1P38428 ESC8YOL017W 2145 nt5.44□□□□□ -1.54
CUE1P38428 BZZ1YHR114W 1902 nt5.43□□□□□ -1.54
CUE1P38428 IME2YJL106W 1938 nt5.43□□□□□ -1.54
CUE1P38428 PAP2YOL115W 1755 nt5.43□□□□□ -1.54
CUE1P38428 AIM20YIL158W 615 nt5.43□□□□□ -1.54
CUE1P38428 FBA1YKL060C 1080 nt5.43□□□□□ -1.54
CUE1P38428 YKL102CYKL102C 306 nt5.43□□□□□ -1.54
CUE1P38428 YNL120CYNL120C 486 nt5.43□□□□□ -1.54
CUE1P38428 RFC4YOL094C 972 nt5.43□□□□□ -1.54
CUE1P38428 RDL2YOR286W 450 nt5.43□□□□□ -1.54
CUE1P38428 HST2YPL015C 1074 nt5.43□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 30 ms