Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mir6538-201ENSMUST00000183713 110 ntBASIC20.41■□□□□ 0.86
Thbs1P35441 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thbs1P35441 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.4■□□□□ 0.86
Thbs1P35441 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thbs1P35441 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Thbs1P35441 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Thbs1P35441 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Thbs1P35441 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thbs1P35441 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thbs1P35441 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thbs1P35441 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.38■□□□□ 0.85
Thbs1P35441 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Thbs1P35441 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thbs1P35441 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Thbs1P35441 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thbs1P35441 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Thbs1P35441 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.37■□□□□ 0.85
Thbs1P35441 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Thbs1P35441 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thbs1P35441 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thbs1P35441 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thbs1P35441 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Thbs1P35441 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Thbs1P35441 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.36■□□□□ 0.85
Thbs1P35441 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Thbs1P35441 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thbs1P35441 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thbs1P35441 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Thbs1P35441 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Thbs1P35441 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thbs1P35441 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thbs1P35441 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
Thbs1P35441 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.34■□□□□ 0.85
Thbs1P35441 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Thbs1P35441 Gm22567-201ENSMUST00000175542 342 ntBASIC20.34■□□□□ 0.85
Thbs1P35441 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Thbs1P35441 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thbs1P35441 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Thbs1P35441 Gm44428-201ENSMUST00000204474 874 ntBASIC20.33■□□□□ 0.85
Thbs1P35441 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Thbs1P35441 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thbs1P35441 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thbs1P35441 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Thbs1P35441 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.32■□□□□ 0.84
Thbs1P35441 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Thbs1P35441 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Thbs1P35441 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thbs1P35441 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thbs1P35441 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Thbs1P35441 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Thbs1P35441 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Thbs1P35441 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Thbs1P35441 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Thbs1P35441 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thbs1P35441 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thbs1P35441 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Thbs1P35441 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thbs1P35441 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.3■□□□□ 0.84
Thbs1P35441 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thbs1P35441 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Thbs1P35441 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Thbs1P35441 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thbs1P35441 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thbs1P35441 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Thbs1P35441 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Thbs1P35441 Gm9806-201ENSMUST00000051080 552 ntBASIC20.28■□□□□ 0.84
Thbs1P35441 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thbs1P35441 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thbs1P35441 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Thbs1P35441 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thbs1P35441 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Thbs1P35441 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.27■□□□□ 0.84
Thbs1P35441 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.27■□□□□ 0.84
Thbs1P35441 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Thbs1P35441 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Thbs1P35441 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.27■□□□□ 0.84
Thbs1P35441 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 164.7 ms