Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1cO08604 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.7■□□□□ 0.74
Raet1cO08604 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Raet1cO08604 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Raet1cO08604 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Raet1cO08604 Gm9806-201ENSMUST00000051080 552 ntBASIC19.7■□□□□ 0.74
Raet1cO08604 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Raet1cO08604 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Raet1cO08604 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Raet1cO08604 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
Raet1cO08604 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Raet1cO08604 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1cO08604 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1cO08604 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Raet1cO08604 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Raet1cO08604 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.68■□□□□ 0.74
Raet1cO08604 Gm16437-201ENSMUST00000025669 507 ntBASIC19.68■□□□□ 0.74
Raet1cO08604 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.68■□□□□ 0.74
Raet1cO08604 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Raet1cO08604 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1cO08604 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1cO08604 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1cO08604 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1cO08604 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1cO08604 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Raet1cO08604 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Raet1cO08604 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.66■□□□□ 0.74
Raet1cO08604 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Raet1cO08604 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Raet1cO08604 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Raet1cO08604 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Raet1cO08604 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Raet1cO08604 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1cO08604 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1cO08604 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.65■□□□□ 0.74
Raet1cO08604 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1cO08604 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1cO08604 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1cO08604 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
Raet1cO08604 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Raet1cO08604 Gm11687-201ENSMUST00000118911 886 ntBASIC19.64■□□□□ 0.73
Raet1cO08604 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Raet1cO08604 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Raet1cO08604 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Raet1cO08604 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.64■□□□□ 0.73
Raet1cO08604 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1cO08604 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1cO08604 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1cO08604 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1cO08604 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1cO08604 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.62■□□□□ 0.73
Raet1cO08604 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1cO08604 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Raet1cO08604 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1cO08604 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1cO08604 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Raet1cO08604 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Raet1cO08604 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Raet1cO08604 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Raet1cO08604 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.6■□□□□ 0.73
Raet1cO08604 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Raet1cO08604 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Raet1cO08604 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1cO08604 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1cO08604 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1cO08604 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.59■□□□□ 0.73
Raet1cO08604 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1cO08604 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1cO08604 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1cO08604 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Raet1cO08604 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Raet1cO08604 Gm44428-201ENSMUST00000204474 874 ntBASIC19.58■□□□□ 0.72
Raet1cO08604 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1cO08604 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1cO08604 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.58■□□□□ 0.72
Raet1cO08604 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Raet1cO08604 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Raet1cO08604 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Raet1cO08604 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Raet1cO08604 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.57■□□□□ 0.72
Raet1cO08604 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Raet1cO08604 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Raet1cO08604 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.56■□□□□ 0.72
Raet1cO08604 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Raet1cO08604 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.55■□□□□ 0.72
Raet1cO08604 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1cO08604 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.55■□□□□ 0.72
Raet1cO08604 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Raet1cO08604 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Raet1cO08604 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.54■□□□□ 0.72
Raet1cO08604 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Raet1cO08604 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Raet1cO08604 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms