Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.62■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.61■□□□□ 0.25
Trav3n-3A0A0G2JEM0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Gm30023-201ENSMUST00000197970 889 ntBASIC16.61■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav3n-3A0A0G2JEM0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Gm45855-201ENSMUST00000212546 880 ntBASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3n-3A0A0G2JEM0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav3n-3A0A0G2JEM0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav3n-3A0A0G2JEM0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav3n-3A0A0G2JEM0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav3n-3A0A0G2JEM0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms