Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav21-dv12A0A075B6C4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav21-dv12A0A075B6C4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav21-dv12A0A075B6C4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav21-dv12A0A075B6C4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav21-dv12A0A075B6C4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav21-dv12A0A075B6C4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav21-dv12A0A075B6C4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav21-dv12A0A075B6C4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav21-dv12A0A075B6C4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.89■□□□□ 0.29
Trav21-dv12A0A075B6C4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav21-dv12A0A075B6C4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav21-dv12A0A075B6C4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav21-dv12A0A075B6C4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Terc-201ENSMUST00000082862 423 ntBASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav21-dv12A0A075B6C4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav21-dv12A0A075B6C4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav21-dv12A0A075B6C4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav21-dv12A0A075B6C4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav21-dv12A0A075B6C4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav21-dv12A0A075B6C4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav21-dv12A0A075B6C4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav21-dv12A0A075B6C4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav21-dv12A0A075B6C4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav21-dv12A0A075B6C4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav21-dv12A0A075B6C4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav21-dv12A0A075B6C4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav21-dv12A0A075B6C4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav21-dv12A0A075B6C4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav21-dv12A0A075B6C4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Gm6311-201ENSMUST00000073790 878 ntBASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav21-dv12A0A075B6C4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav21-dv12A0A075B6C4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav21-dv12A0A075B6C4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav21-dv12A0A075B6C4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav21-dv12A0A075B6C4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms