Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv3-1A0A075B5S6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv3-1A0A075B5S6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.61■□□□□ 0.41
Ighv3-1A0A075B5S6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ighv3-1A0A075B5S6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-1A0A075B5S6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ighv3-1A0A075B5S6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ighv3-1A0A075B5S6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-1A0A075B5S6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-1A0A075B5S6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv3-1A0A075B5S6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-1A0A075B5S6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ighv3-1A0A075B5S6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-1A0A075B5S6 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.59■□□□□ 0.41
Ighv3-1A0A075B5S6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-1A0A075B5S6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv3-1A0A075B5S6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv3-1A0A075B5S6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv3-1A0A075B5S6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ighv3-1A0A075B5S6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.58■□□□□ 0.4
Ighv3-1A0A075B5S6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-1A0A075B5S6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ighv3-1A0A075B5S6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-1A0A075B5S6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv3-1A0A075B5S6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-1A0A075B5S6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-1A0A075B5S6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.56■□□□□ 0.4
Ighv3-1A0A075B5S6 Gm22567-201ENSMUST00000175542 342 ntBASIC17.56■□□□□ 0.4
Ighv3-1A0A075B5S6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv3-1A0A075B5S6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv3-1A0A075B5S6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-1A0A075B5S6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.54■□□□□ 0.4
Ighv3-1A0A075B5S6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-1A0A075B5S6 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.54■□□□□ 0.4
Ighv3-1A0A075B5S6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-1A0A075B5S6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-1A0A075B5S6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-1A0A075B5S6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ighv3-1A0A075B5S6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.53■□□□□ 0.4
Ighv3-1A0A075B5S6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-1A0A075B5S6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Ighv3-1A0A075B5S6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.52■□□□□ 0.4
Ighv3-1A0A075B5S6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv3-1A0A075B5S6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv3-1A0A075B5S6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ighv3-1A0A075B5S6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv3-1A0A075B5S6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv3-1A0A075B5S6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-1A0A075B5S6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ighv3-1A0A075B5S6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-1A0A075B5S6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.51■□□□□ 0.39
Ighv3-1A0A075B5S6 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.51■□□□□ 0.39
Ighv3-1A0A075B5S6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-1A0A075B5S6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv3-1A0A075B5S6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ighv3-1A0A075B5S6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv3-1A0A075B5S6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ighv3-1A0A075B5S6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv3-1A0A075B5S6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv3-1A0A075B5S6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-1A0A075B5S6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Gm43566-201ENSMUST00000196851 808 ntBASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-1A0A075B5S6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms