Protein–RNA interactions for Protein: Q9JM61

Thsd1, Thrombospondin type-1 domain-containing protein 1, mousemouse

Predictions only

Length 851 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thsd1Q9JM61 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Thsd1Q9JM61 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thsd1Q9JM61 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Thsd1Q9JM61 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.6■□□□□ 0.89
Thsd1Q9JM61 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thsd1Q9JM61 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Thsd1Q9JM61 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thsd1Q9JM61 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thsd1Q9JM61 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thsd1Q9JM61 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thsd1Q9JM61 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thsd1Q9JM61 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Thsd1Q9JM61 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Thsd1Q9JM61 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Thsd1Q9JM61 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.58■□□□□ 0.89
Thsd1Q9JM61 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Thsd1Q9JM61 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Thsd1Q9JM61 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Thsd1Q9JM61 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thsd1Q9JM61 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thsd1Q9JM61 Gm10420-201ENSMUST00000121713 882 ntBASIC20.56■□□□□ 0.88
Thsd1Q9JM61 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Thsd1Q9JM61 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thsd1Q9JM61 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.55■□□□□ 0.88
Thsd1Q9JM61 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thsd1Q9JM61 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Thsd1Q9JM61 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Thsd1Q9JM61 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.53■□□□□ 0.88
Thsd1Q9JM61 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Thsd1Q9JM61 Gm5921-201ENSMUST00000075898 882 ntBASIC20.53■□□□□ 0.88
Thsd1Q9JM61 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Thsd1Q9JM61 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.52■□□□□ 0.88
Thsd1Q9JM61 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Thsd1Q9JM61 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Thsd1Q9JM61 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.51■□□□□ 0.87
Thsd1Q9JM61 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thsd1Q9JM61 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.51■□□□□ 0.87
Thsd1Q9JM61 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thsd1Q9JM61 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thsd1Q9JM61 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thsd1Q9JM61 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thsd1Q9JM61 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Thsd1Q9JM61 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thsd1Q9JM61 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thsd1Q9JM61 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thsd1Q9JM61 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Thsd1Q9JM61 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thsd1Q9JM61 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thsd1Q9JM61 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Thsd1Q9JM61 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Gm15546-201ENSMUST00000122095 826 ntBASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.48■□□□□ 0.87
Thsd1Q9JM61 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Thsd1Q9JM61 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Thsd1Q9JM61 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Thsd1Q9JM61 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thsd1Q9JM61 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.46■□□□□ 0.87
Thsd1Q9JM61 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thsd1Q9JM61 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.46■□□□□ 0.87
Thsd1Q9JM61 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Thsd1Q9JM61 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thsd1Q9JM61 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Thsd1Q9JM61 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thsd1Q9JM61 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Thsd1Q9JM61 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Thsd1Q9JM61 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Gm9812-201ENSMUST00000061934 968 ntBASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thsd1Q9JM61 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thsd1Q9JM61 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms