Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msantd3Q9CR78 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msantd3Q9CR78 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msantd3Q9CR78 Gm15039-201ENSMUST00000118914 875 ntBASIC21.4■■□□□ 1.02
Msantd3Q9CR78 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.4■■□□□ 1.02
Msantd3Q9CR78 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.4■■□□□ 1.02
Msantd3Q9CR78 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Msantd3Q9CR78 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Msantd3Q9CR78 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Msantd3Q9CR78 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.39■■□□□ 1.01
Msantd3Q9CR78 Rps24-207ENSMUST00000224568 714 ntBASIC21.39■■□□□ 1.01
Msantd3Q9CR78 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msantd3Q9CR78 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.38■■□□□ 1.01
Msantd3Q9CR78 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.38■■□□□ 1.01
Msantd3Q9CR78 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Gm13238-201ENSMUST00000117655 780 ntBASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Gm15820-201ENSMUST00000201566 728 ntBASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msantd3Q9CR78 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msantd3Q9CR78 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msantd3Q9CR78 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.36■■□□□ 1.01
Msantd3Q9CR78 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.35■■□□□ 1.01
Msantd3Q9CR78 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msantd3Q9CR78 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.35■■□□□ 1.01
Msantd3Q9CR78 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Msantd3Q9CR78 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Msantd3Q9CR78 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msantd3Q9CR78 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.33■■□□□ 1.01
Msantd3Q9CR78 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.33■■□□□ 1.01
Msantd3Q9CR78 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Msantd3Q9CR78 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Msantd3Q9CR78 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.32■■□□□ 1
Msantd3Q9CR78 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Msantd3Q9CR78 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.32■■□□□ 1
Msantd3Q9CR78 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.32■■□□□ 1
Msantd3Q9CR78 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msantd3Q9CR78 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Msantd3Q9CR78 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.31■■□□□ 1
Msantd3Q9CR78 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Msantd3Q9CR78 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Msantd3Q9CR78 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.31■■□□□ 1
Msantd3Q9CR78 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msantd3Q9CR78 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msantd3Q9CR78 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msantd3Q9CR78 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msantd3Q9CR78 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Msantd3Q9CR78 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.3■■□□□ 1
Msantd3Q9CR78 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.29■■□□□ 1
Msantd3Q9CR78 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Msantd3Q9CR78 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Msantd3Q9CR78 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Msantd3Q9CR78 Gm45102-201ENSMUST00000207427 857 ntBASIC21.29■■□□□ 1
Msantd3Q9CR78 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.29■■□□□ 1
Msantd3Q9CR78 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Msantd3Q9CR78 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Msantd3Q9CR78 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Msantd3Q9CR78 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Msantd3Q9CR78 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Msantd3Q9CR78 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.28■■□□□ 1
Msantd3Q9CR78 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.28■■□□□ 1
Msantd3Q9CR78 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.27■■□□□ 1
Msantd3Q9CR78 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Msantd3Q9CR78 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Msantd3Q9CR78 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.27■■□□□ 1
Msantd3Q9CR78 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Msantd3Q9CR78 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Msantd3Q9CR78 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Msantd3Q9CR78 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Msantd3Q9CR78 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Msantd3Q9CR78 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Msantd3Q9CR78 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Msantd3Q9CR78 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Msantd3Q9CR78 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Msantd3Q9CR78 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.25■□□□□ 0.99
Msantd3Q9CR78 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Msantd3Q9CR78 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.24■□□□□ 0.99
Msantd3Q9CR78 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Msantd3Q9CR78 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Msantd3Q9CR78 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Msantd3Q9CR78 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms