Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trim33Q99PP7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim33Q99PP7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim33Q99PP7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim33Q99PP7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim33Q99PP7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim33Q99PP7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trim33Q99PP7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.92■■□□□ 1.1
Trim33Q99PP7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim33Q99PP7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
Trim33Q99PP7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim33Q99PP7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Trim33Q99PP7 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.91■■□□□ 1.1
Trim33Q99PP7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim33Q99PP7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim33Q99PP7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim33Q99PP7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.9■■□□□ 1.1
Trim33Q99PP7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim33Q99PP7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim33Q99PP7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Trim33Q99PP7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.89■■□□□ 1.09
Trim33Q99PP7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim33Q99PP7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim33Q99PP7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim33Q99PP7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim33Q99PP7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim33Q99PP7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim33Q99PP7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim33Q99PP7 Mir6538-201ENSMUST00000183713 110 ntBASIC21.88■■□□□ 1.09
Trim33Q99PP7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Trim33Q99PP7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trim33Q99PP7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim33Q99PP7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.87■■□□□ 1.09
Trim33Q99PP7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim33Q99PP7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim33Q99PP7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim33Q99PP7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trim33Q99PP7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim33Q99PP7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim33Q99PP7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim33Q99PP7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Trim33Q99PP7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim33Q99PP7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim33Q99PP7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Trim33Q99PP7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim33Q99PP7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim33Q99PP7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.83■■□□□ 1.09
Trim33Q99PP7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.83■■□□□ 1.08
Trim33Q99PP7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim33Q99PP7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim33Q99PP7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim33Q99PP7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim33Q99PP7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.8■■□□□ 1.08
Trim33Q99PP7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim33Q99PP7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim33Q99PP7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim33Q99PP7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim33Q99PP7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim33Q99PP7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim33Q99PP7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim33Q99PP7 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.78■■□□□ 1.08
Trim33Q99PP7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim33Q99PP7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim33Q99PP7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim33Q99PP7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trim33Q99PP7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim33Q99PP7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.77■■□□□ 1.08
Trim33Q99PP7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
Trim33Q99PP7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim33Q99PP7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.76■■□□□ 1.07
Trim33Q99PP7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim33Q99PP7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim33Q99PP7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms