Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm7199-201ENSMUST00000118327 1485 ntBASIC23■■□□□ 1.27
Pcdhb6Q91XZ4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb6Q91XZ4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Pcdhb6Q91XZ4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb6Q91XZ4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Pcdhb6Q91XZ4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb6Q91XZ4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb6Q91XZ4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb6Q91XZ4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.99■■□□□ 1.27
Pcdhb6Q91XZ4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb6Q91XZ4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.99■■□□□ 1.27
Pcdhb6Q91XZ4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb6Q91XZ4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb6Q91XZ4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb6Q91XZ4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb6Q91XZ4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb6Q91XZ4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb6Q91XZ4 Scarna2-201ENSMUST00000157560 414 ntBASIC22.95■■□□□ 1.26
Pcdhb6Q91XZ4 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.95■■□□□ 1.26
Pcdhb6Q91XZ4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb6Q91XZ4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.93■■□□□ 1.26
Pcdhb6Q91XZ4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb6Q91XZ4 Gm9806-201ENSMUST00000051080 552 ntBASIC22.93■■□□□ 1.26
Pcdhb6Q91XZ4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb6Q91XZ4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.92■■□□□ 1.26
Pcdhb6Q91XZ4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Pcdhb6Q91XZ4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Pcdhb6Q91XZ4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb6Q91XZ4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb6Q91XZ4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.91■■□□□ 1.26
Pcdhb6Q91XZ4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhb6Q91XZ4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb6Q91XZ4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb6Q91XZ4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb6Q91XZ4 Gm16437-201ENSMUST00000025669 507 ntBASIC22.9■■□□□ 1.26
Pcdhb6Q91XZ4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb6Q91XZ4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb6Q91XZ4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb6Q91XZ4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb6Q91XZ4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb6Q91XZ4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Pcdhb6Q91XZ4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb6Q91XZ4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.88■■□□□ 1.25
Pcdhb6Q91XZ4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhb6Q91XZ4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb6Q91XZ4 Gm44428-201ENSMUST00000204474 874 ntBASIC22.87■■□□□ 1.25
Pcdhb6Q91XZ4 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.86■■□□□ 1.25
Pcdhb6Q91XZ4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb6Q91XZ4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.85■■□□□ 1.25
Pcdhb6Q91XZ4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Pcdhb6Q91XZ4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb6Q91XZ4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb6Q91XZ4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb6Q91XZ4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb6Q91XZ4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb6Q91XZ4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb6Q91XZ4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Pcdhb6Q91XZ4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms