Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga6Q91XY2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga6Q91XY2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga6Q91XY2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.06■■□□□ 1.12
Pcdhga6Q91XY2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhga6Q91XY2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga6Q91XY2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga6Q91XY2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga6Q91XY2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga6Q91XY2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga6Q91XY2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga6Q91XY2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga6Q91XY2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga6Q91XY2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga6Q91XY2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhga6Q91XY2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Pcdhga6Q91XY2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga6Q91XY2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga6Q91XY2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22■■□□□ 1.11
Pcdhga6Q91XY2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga6Q91XY2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhga6Q91XY2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga6Q91XY2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga6Q91XY2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga6Q91XY2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhga6Q91XY2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga6Q91XY2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga6Q91XY2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhga6Q91XY2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhga6Q91XY2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.97■■□□□ 1.11
Pcdhga6Q91XY2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga6Q91XY2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga6Q91XY2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga6Q91XY2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga6Q91XY2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga6Q91XY2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga6Q91XY2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga6Q91XY2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhga6Q91XY2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcdhga6Q91XY2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga6Q91XY2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdhga6Q91XY2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.91■■□□□ 1.1
Pcdhga6Q91XY2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga6Q91XY2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga6Q91XY2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhga6Q91XY2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga6Q91XY2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.9■■□□□ 1.1
Pcdhga6Q91XY2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga6Q91XY2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhga6Q91XY2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Pcdhga6Q91XY2 Etf1-202ENSMUST00000180351 108 ntBASIC21.89■■□□□ 1.09
Pcdhga6Q91XY2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdhga6Q91XY2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhga6Q91XY2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga6Q91XY2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdhga6Q91XY2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhga6Q91XY2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.88■■□□□ 1.09
Pcdhga6Q91XY2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhga6Q91XY2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.88■■□□□ 1.09
Pcdhga6Q91XY2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.87■■□□□ 1.09
Pcdhga6Q91XY2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
Pcdhga6Q91XY2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhga6Q91XY2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms