Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cspg4Q8VHY0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.59■□□□□ 0.73
Cspg4Q8VHY0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cspg4Q8VHY0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cspg4Q8VHY0 Gm10232-201ENSMUST00000089221 720 ntBASIC19.58■□□□□ 0.73
Cspg4Q8VHY0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cspg4Q8VHY0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg4Q8VHY0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.57■□□□□ 0.72
Cspg4Q8VHY0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg4Q8VHY0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg4Q8VHY0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cspg4Q8VHY0 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.55■□□□□ 0.72
Cspg4Q8VHY0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cspg4Q8VHY0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.54■□□□□ 0.72
Cspg4Q8VHY0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg4Q8VHY0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.54■□□□□ 0.72
Cspg4Q8VHY0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg4Q8VHY0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg4Q8VHY0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cspg4Q8VHY0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cspg4Q8VHY0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cspg4Q8VHY0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Gm9847-201ENSMUST00000052528 599 ntBASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cspg4Q8VHY0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg4Q8VHY0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg4Q8VHY0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg4Q8VHY0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.5■□□□□ 0.71
Cspg4Q8VHY0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cspg4Q8VHY0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cspg4Q8VHY0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.48■□□□□ 0.71
Cspg4Q8VHY0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cspg4Q8VHY0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cspg4Q8VHY0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cspg4Q8VHY0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cspg4Q8VHY0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cspg4Q8VHY0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cspg4Q8VHY0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.47■□□□□ 0.71
Cspg4Q8VHY0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cspg4Q8VHY0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cspg4Q8VHY0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cspg4Q8VHY0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Gm29257-201ENSMUST00000186115 639 ntBASIC19.46■□□□□ 0.71
Cspg4Q8VHY0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cspg4Q8VHY0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.44■□□□□ 0.7
Cspg4Q8VHY0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.44■□□□□ 0.7
Cspg4Q8VHY0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.44■□□□□ 0.7
Cspg4Q8VHY0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cspg4Q8VHY0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cspg4Q8VHY0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.43■□□□□ 0.7
Cspg4Q8VHY0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cspg4Q8VHY0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cspg4Q8VHY0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cspg4Q8VHY0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.42■□□□□ 0.7
Cspg4Q8VHY0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg4Q8VHY0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cspg4Q8VHY0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg4Q8VHY0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg4Q8VHY0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cspg4Q8VHY0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cspg4Q8VHY0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg4Q8VHY0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg4Q8VHY0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.4■□□□□ 0.7
Cspg4Q8VHY0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg4Q8VHY0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg4Q8VHY0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg4Q8VHY0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms