Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab43Q8CG50 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rab43Q8CG50 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rab43Q8CG50 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rab43Q8CG50 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab43Q8CG50 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.87■■□□□ 1.09
Rab43Q8CG50 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab43Q8CG50 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab43Q8CG50 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.86■■□□□ 1.09
Rab43Q8CG50 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab43Q8CG50 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab43Q8CG50 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rab43Q8CG50 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.85■■□□□ 1.09
Rab43Q8CG50 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab43Q8CG50 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab43Q8CG50 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.84■■□□□ 1.09
Rab43Q8CG50 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.84■■□□□ 1.09
Rab43Q8CG50 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.84■■□□□ 1.09
Rab43Q8CG50 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.84■■□□□ 1.09
Rab43Q8CG50 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab43Q8CG50 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rab43Q8CG50 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rab43Q8CG50 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rab43Q8CG50 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rab43Q8CG50 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab43Q8CG50 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.83■■□□□ 1.09
Rab43Q8CG50 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab43Q8CG50 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rab43Q8CG50 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rab43Q8CG50 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.82■■□□□ 1.08
Rab43Q8CG50 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rab43Q8CG50 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rab43Q8CG50 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.81■■□□□ 1.08
Rab43Q8CG50 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rab43Q8CG50 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rab43Q8CG50 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rab43Q8CG50 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.79■■□□□ 1.08
Rab43Q8CG50 Rps24-207ENSMUST00000224568 714 ntBASIC21.79■■□□□ 1.08
Rab43Q8CG50 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rab43Q8CG50 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Rab43Q8CG50 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab43Q8CG50 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rab43Q8CG50 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rab43Q8CG50 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab43Q8CG50 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.78■■□□□ 1.08
Rab43Q8CG50 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.78■■□□□ 1.08
Rab43Q8CG50 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab43Q8CG50 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab43Q8CG50 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.77■■□□□ 1.08
Rab43Q8CG50 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rab43Q8CG50 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab43Q8CG50 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Rab43Q8CG50 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rab43Q8CG50 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rab43Q8CG50 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rab43Q8CG50 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.76■■□□□ 1.07
Rab43Q8CG50 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rab43Q8CG50 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.75■■□□□ 1.07
Rab43Q8CG50 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rab43Q8CG50 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rab43Q8CG50 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.75■■□□□ 1.07
Rab43Q8CG50 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Rab43Q8CG50 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Rab43Q8CG50 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.74■■□□□ 1.07
Rab43Q8CG50 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rab43Q8CG50 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rab43Q8CG50 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab43Q8CG50 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rab43Q8CG50 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Rab43Q8CG50 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.72■■□□□ 1.07
Rab43Q8CG50 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab43Q8CG50 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab43Q8CG50 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.71■■□□□ 1.07
Rab43Q8CG50 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rab43Q8CG50 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rab43Q8CG50 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rab43Q8CG50 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rab43Q8CG50 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab43Q8CG50 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.69■■□□□ 1.06
Rab43Q8CG50 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab43Q8CG50 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms