Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cc2d1bQ8BRN9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cc2d1bQ8BRN9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.54■■□□□ 1.52
Cc2d1bQ8BRN9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cc2d1bQ8BRN9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cc2d1bQ8BRN9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.53■■□□□ 1.52
Cc2d1bQ8BRN9 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.53■■□□□ 1.52
Cc2d1bQ8BRN9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Cc2d1bQ8BRN9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.53■■□□□ 1.52
Cc2d1bQ8BRN9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.53■■□□□ 1.52
Cc2d1bQ8BRN9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cc2d1bQ8BRN9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.52■■□□□ 1.52
Cc2d1bQ8BRN9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cc2d1bQ8BRN9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.52■■□□□ 1.52
Cc2d1bQ8BRN9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cc2d1bQ8BRN9 Terc-201ENSMUST00000082862 423 ntBASIC24.52■■□□□ 1.52
Cc2d1bQ8BRN9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cc2d1bQ8BRN9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cc2d1bQ8BRN9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cc2d1bQ8BRN9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cc2d1bQ8BRN9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cc2d1bQ8BRN9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cc2d1bQ8BRN9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cc2d1bQ8BRN9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.5■■□□□ 1.51
Cc2d1bQ8BRN9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cc2d1bQ8BRN9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cc2d1bQ8BRN9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cc2d1bQ8BRN9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cc2d1bQ8BRN9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cc2d1bQ8BRN9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Cc2d1bQ8BRN9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cc2d1bQ8BRN9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.47■■□□□ 1.51
Cc2d1bQ8BRN9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.47■■□□□ 1.51
Cc2d1bQ8BRN9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Cc2d1bQ8BRN9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cc2d1bQ8BRN9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cc2d1bQ8BRN9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cc2d1bQ8BRN9 Gm6311-201ENSMUST00000073790 878 ntBASIC24.46■■□□□ 1.51
Cc2d1bQ8BRN9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.45■■□□□ 1.51
Cc2d1bQ8BRN9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
Cc2d1bQ8BRN9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cc2d1bQ8BRN9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Cc2d1bQ8BRN9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cc2d1bQ8BRN9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cc2d1bQ8BRN9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.43■■□□□ 1.5
Cc2d1bQ8BRN9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cc2d1bQ8BRN9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cc2d1bQ8BRN9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Cc2d1bQ8BRN9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Cc2d1bQ8BRN9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cc2d1bQ8BRN9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Cc2d1bQ8BRN9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cc2d1bQ8BRN9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cc2d1bQ8BRN9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cc2d1bQ8BRN9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Cc2d1bQ8BRN9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Cc2d1bQ8BRN9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cc2d1bQ8BRN9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cc2d1bQ8BRN9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Cc2d1bQ8BRN9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cc2d1bQ8BRN9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cc2d1bQ8BRN9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Cc2d1bQ8BRN9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cc2d1bQ8BRN9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cc2d1bQ8BRN9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cc2d1bQ8BRN9 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.37■■□□□ 1.49
Cc2d1bQ8BRN9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cc2d1bQ8BRN9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.37■■□□□ 1.49
Cc2d1bQ8BRN9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cc2d1bQ8BRN9 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.36■■□□□ 1.49
Cc2d1bQ8BRN9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cc2d1bQ8BRN9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.36■■□□□ 1.49
Cc2d1bQ8BRN9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cc2d1bQ8BRN9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Cc2d1bQ8BRN9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.35■■□□□ 1.49
Cc2d1bQ8BRN9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms