Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tdp1Q8BJ37 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Tdp1Q8BJ37 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25■■□□□ 1.59
Tdp1Q8BJ37 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tdp1Q8BJ37 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tdp1Q8BJ37 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tdp1Q8BJ37 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Tdp1Q8BJ37 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.98■■□□□ 1.59
Tdp1Q8BJ37 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Tdp1Q8BJ37 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.98■■□□□ 1.59
Tdp1Q8BJ37 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tdp1Q8BJ37 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tdp1Q8BJ37 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tdp1Q8BJ37 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tdp1Q8BJ37 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Tdp1Q8BJ37 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tdp1Q8BJ37 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Tdp1Q8BJ37 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Tdp1Q8BJ37 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Tdp1Q8BJ37 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Tdp1Q8BJ37 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Tdp1Q8BJ37 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.95■■□□□ 1.58
Tdp1Q8BJ37 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tdp1Q8BJ37 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Tdp1Q8BJ37 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tdp1Q8BJ37 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Tdp1Q8BJ37 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tdp1Q8BJ37 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tdp1Q8BJ37 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tdp1Q8BJ37 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Tdp1Q8BJ37 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tdp1Q8BJ37 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Tdp1Q8BJ37 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tdp1Q8BJ37 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Tdp1Q8BJ37 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.91■■□□□ 1.58
Tdp1Q8BJ37 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Tdp1Q8BJ37 Rps24-207ENSMUST00000224568 714 ntBASIC24.91■■□□□ 1.58
Tdp1Q8BJ37 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tdp1Q8BJ37 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Tdp1Q8BJ37 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tdp1Q8BJ37 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.9■■□□□ 1.58
Tdp1Q8BJ37 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.9■■□□□ 1.58
Tdp1Q8BJ37 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.89■■□□□ 1.58
Tdp1Q8BJ37 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Tdp1Q8BJ37 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Tdp1Q8BJ37 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Tdp1Q8BJ37 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Tdp1Q8BJ37 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tdp1Q8BJ37 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.88■■□□□ 1.57
Tdp1Q8BJ37 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tdp1Q8BJ37 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Tdp1Q8BJ37 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tdp1Q8BJ37 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tdp1Q8BJ37 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tdp1Q8BJ37 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Tdp1Q8BJ37 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tdp1Q8BJ37 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 Gm45102-201ENSMUST00000207427 857 ntBASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.85■■□□□ 1.57
Tdp1Q8BJ37 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tdp1Q8BJ37 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tdp1Q8BJ37 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Tdp1Q8BJ37 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tdp1Q8BJ37 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Tdp1Q8BJ37 Gm14117-201ENSMUST00000122417 843 ntBASIC24.83■■□□□ 1.57
Tdp1Q8BJ37 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tdp1Q8BJ37 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tdp1Q8BJ37 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Tdp1Q8BJ37 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Tdp1Q8BJ37 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tdp1Q8BJ37 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tdp1Q8BJ37 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tdp1Q8BJ37 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tdp1Q8BJ37 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.81■■□□□ 1.56
Tdp1Q8BJ37 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tdp1Q8BJ37 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Tdp1Q8BJ37 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tdp1Q8BJ37 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tdp1Q8BJ37 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Tdp1Q8BJ37 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tdp1Q8BJ37 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Tdp1Q8BJ37 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms