Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.93■■□□□ 1.58
Usp6nlQ80XC3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Usp6nlQ80XC3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Usp6nlQ80XC3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Usp6nlQ80XC3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Usp6nlQ80XC3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.92■■□□□ 1.58
Usp6nlQ80XC3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Usp6nlQ80XC3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Usp6nlQ80XC3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Usp6nlQ80XC3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Usp6nlQ80XC3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Usp6nlQ80XC3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Usp6nlQ80XC3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Usp6nlQ80XC3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Usp6nlQ80XC3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Usp6nlQ80XC3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Usp6nlQ80XC3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.58
Usp6nlQ80XC3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Usp6nlQ80XC3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Usp6nlQ80XC3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Usp6nlQ80XC3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Usp6nlQ80XC3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Usp6nlQ80XC3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Usp6nlQ80XC3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Usp6nlQ80XC3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Usp6nlQ80XC3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Usp6nlQ80XC3 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.87■■□□□ 1.57
Usp6nlQ80XC3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Usp6nlQ80XC3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Usp6nlQ80XC3 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.87■■□□□ 1.57
Usp6nlQ80XC3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Usp6nlQ80XC3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Usp6nlQ80XC3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Usp6nlQ80XC3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.86■■□□□ 1.57
Usp6nlQ80XC3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Gm14117-201ENSMUST00000122417 843 ntBASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Usp6nlQ80XC3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Usp6nlQ80XC3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.83■■□□□ 1.57
Usp6nlQ80XC3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Usp6nlQ80XC3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Usp6nlQ80XC3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Usp6nlQ80XC3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Usp6nlQ80XC3 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.83■■□□□ 1.57
Usp6nlQ80XC3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Usp6nlQ80XC3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Usp6nlQ80XC3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Usp6nlQ80XC3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Usp6nlQ80XC3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Usp6nlQ80XC3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.81■■□□□ 1.56
Usp6nlQ80XC3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.81■■□□□ 1.56
Usp6nlQ80XC3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Usp6nlQ80XC3 Gm9959-201ENSMUST00000068277 390 ntBASIC24.81■■□□□ 1.56
Usp6nlQ80XC3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
Usp6nlQ80XC3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Usp6nlQ80XC3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Usp6nlQ80XC3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.8■■□□□ 1.56
Usp6nlQ80XC3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Usp6nlQ80XC3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Usp6nlQ80XC3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Usp6nlQ80XC3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.78■■□□□ 1.56
Usp6nlQ80XC3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Usp6nlQ80XC3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Usp6nlQ80XC3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Usp6nlQ80XC3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Usp6nlQ80XC3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.76■■□□□ 1.55
Usp6nlQ80XC3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Usp6nlQ80XC3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Usp6nlQ80XC3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Usp6nlQ80XC3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Usp6nlQ80XC3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Usp6nlQ80XC3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Usp6nlQ80XC3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Usp6nlQ80XC3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Usp6nlQ80XC3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Usp6nlQ80XC3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Usp6nlQ80XC3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.73■■□□□ 1.55
Usp6nlQ80XC3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp6nlQ80XC3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp6nlQ80XC3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Usp6nlQ80XC3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.72■■□□□ 1.55
Usp6nlQ80XC3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.71■■□□□ 1.55
Usp6nlQ80XC3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Usp6nlQ80XC3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms