Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Vrk1Q80X41 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vrk1Q80X41 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vrk1Q80X41 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Vrk1Q80X41 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vrk1Q80X41 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vrk1Q80X41 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.31■■□□□ 1
Vrk1Q80X41 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vrk1Q80X41 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vrk1Q80X41 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vrk1Q80X41 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vrk1Q80X41 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vrk1Q80X41 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vrk1Q80X41 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vrk1Q80X41 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vrk1Q80X41 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vrk1Q80X41 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Vrk1Q80X41 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Vrk1Q80X41 Gm45444-201ENSMUST00000211394 898 ntBASIC21.28■■□□□ 1
Vrk1Q80X41 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vrk1Q80X41 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vrk1Q80X41 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vrk1Q80X41 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.27■■□□□ 1
Vrk1Q80X41 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vrk1Q80X41 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.27■■□□□ 1
Vrk1Q80X41 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.27■■□□□ 1
Vrk1Q80X41 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Vrk1Q80X41 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vrk1Q80X41 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vrk1Q80X41 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Vrk1Q80X41 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vrk1Q80X41 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vrk1Q80X41 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.26■□□□□ 0.99
Vrk1Q80X41 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vrk1Q80X41 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vrk1Q80X41 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vrk1Q80X41 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vrk1Q80X41 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
Vrk1Q80X41 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.25■□□□□ 0.99
Vrk1Q80X41 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vrk1Q80X41 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Vrk1Q80X41 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vrk1Q80X41 Gm15820-201ENSMUST00000201566 728 ntBASIC21.24■□□□□ 0.99
Vrk1Q80X41 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.24■□□□□ 0.99
Vrk1Q80X41 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vrk1Q80X41 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vrk1Q80X41 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vrk1Q80X41 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vrk1Q80X41 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.23■□□□□ 0.99
Vrk1Q80X41 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Vrk1Q80X41 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.22■□□□□ 0.99
Vrk1Q80X41 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vrk1Q80X41 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.22■□□□□ 0.99
Vrk1Q80X41 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vrk1Q80X41 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Vrk1Q80X41 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vrk1Q80X41 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vrk1Q80X41 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Vrk1Q80X41 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.21■□□□□ 0.99
Vrk1Q80X41 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.21■□□□□ 0.99
Vrk1Q80X41 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.21■□□□□ 0.99
Vrk1Q80X41 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vrk1Q80X41 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Vrk1Q80X41 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vrk1Q80X41 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.2■□□□□ 0.98
Vrk1Q80X41 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vrk1Q80X41 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.2■□□□□ 0.98
Vrk1Q80X41 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vrk1Q80X41 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vrk1Q80X41 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vrk1Q80X41 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.19■□□□□ 0.98
Vrk1Q80X41 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vrk1Q80X41 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vrk1Q80X41 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vrk1Q80X41 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vrk1Q80X41 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Vrk1Q80X41 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vrk1Q80X41 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vrk1Q80X41 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vrk1Q80X41 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vrk1Q80X41 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vrk1Q80X41 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vrk1Q80X41 Rps24-207ENSMUST00000224568 714 ntBASIC21.16■□□□□ 0.98
Vrk1Q80X41 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vrk1Q80X41 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vrk1Q80X41 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vrk1Q80X41 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vrk1Q80X41 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vrk1Q80X41 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vrk1Q80X41 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.15■□□□□ 0.98
Vrk1Q80X41 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vrk1Q80X41 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.14■□□□□ 0.98
Vrk1Q80X41 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vrk1Q80X41 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms