Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim36Q80WG7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim36Q80WG7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Trim36Q80WG7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Trim36Q80WG7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim36Q80WG7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim36Q80WG7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Trim36Q80WG7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.32■■□□□ 1
Trim36Q80WG7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trim36Q80WG7 Gm37136-201ENSMUST00000194368 194 ntBASIC21.32■■□□□ 1
Trim36Q80WG7 Gm6311-201ENSMUST00000073790 878 ntBASIC21.32■■□□□ 1
Trim36Q80WG7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim36Q80WG7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Trim36Q80WG7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim36Q80WG7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim36Q80WG7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim36Q80WG7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trim36Q80WG7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim36Q80WG7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.3■■□□□ 1
Trim36Q80WG7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Trim36Q80WG7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim36Q80WG7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim36Q80WG7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim36Q80WG7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Trim36Q80WG7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim36Q80WG7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim36Q80WG7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.28■■□□□ 1
Trim36Q80WG7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim36Q80WG7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim36Q80WG7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim36Q80WG7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim36Q80WG7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim36Q80WG7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim36Q80WG7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim36Q80WG7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.27■■□□□ 1
Trim36Q80WG7 Mir6538-201ENSMUST00000183713 110 ntBASIC21.27■■□□□ 1
Trim36Q80WG7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim36Q80WG7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim36Q80WG7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Trim36Q80WG7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trim36Q80WG7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim36Q80WG7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim36Q80WG7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim36Q80WG7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim36Q80WG7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim36Q80WG7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim36Q80WG7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim36Q80WG7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim36Q80WG7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim36Q80WG7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim36Q80WG7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim36Q80WG7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim36Q80WG7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim36Q80WG7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim36Q80WG7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim36Q80WG7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim36Q80WG7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim36Q80WG7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim36Q80WG7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim36Q80WG7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.22■□□□□ 0.99
Trim36Q80WG7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim36Q80WG7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.22■□□□□ 0.99
Trim36Q80WG7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim36Q80WG7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim36Q80WG7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim36Q80WG7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim36Q80WG7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim36Q80WG7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim36Q80WG7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim36Q80WG7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim36Q80WG7 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.2■□□□□ 0.98
Trim36Q80WG7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim36Q80WG7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim36Q80WG7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim36Q80WG7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.19■□□□□ 0.98
Trim36Q80WG7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim36Q80WG7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim36Q80WG7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim36Q80WG7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim36Q80WG7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Trim36Q80WG7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim36Q80WG7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim36Q80WG7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim36Q80WG7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Trim36Q80WG7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim36Q80WG7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim36Q80WG7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim36Q80WG7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim36Q80WG7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim36Q80WG7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim36Q80WG7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim36Q80WG7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms