Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx55Q6ZPL9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx55Q6ZPL9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ddx55Q6ZPL9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Ddx55Q6ZPL9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx55Q6ZPL9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx55Q6ZPL9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ddx55Q6ZPL9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx55Q6ZPL9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx55Q6ZPL9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx55Q6ZPL9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ddx55Q6ZPL9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx55Q6ZPL9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ddx55Q6ZPL9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx55Q6ZPL9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ddx55Q6ZPL9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx55Q6ZPL9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx55Q6ZPL9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx55Q6ZPL9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.99■■□□□ 1.75
Ddx55Q6ZPL9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ddx55Q6ZPL9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Ddx55Q6ZPL9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx55Q6ZPL9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.98■■□□□ 1.75
Ddx55Q6ZPL9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ddx55Q6ZPL9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.97■■□□□ 1.75
Ddx55Q6ZPL9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx55Q6ZPL9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx55Q6ZPL9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx55Q6ZPL9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ddx55Q6ZPL9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Ddx55Q6ZPL9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.94■■□□□ 1.74
Ddx55Q6ZPL9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx55Q6ZPL9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx55Q6ZPL9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx55Q6ZPL9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx55Q6ZPL9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx55Q6ZPL9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.93■■□□□ 1.74
Ddx55Q6ZPL9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Ddx55Q6ZPL9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Ddx55Q6ZPL9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.92■■□□□ 1.74
Ddx55Q6ZPL9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Ddx55Q6ZPL9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Ddx55Q6ZPL9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Ddx55Q6ZPL9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx55Q6ZPL9 Gm10232-201ENSMUST00000089221 720 ntBASIC25.9■■□□□ 1.74
Ddx55Q6ZPL9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.89■■□□□ 1.74
Ddx55Q6ZPL9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx55Q6ZPL9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx55Q6ZPL9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.87■■□□□ 1.73
Ddx55Q6ZPL9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.86■■□□□ 1.73
Ddx55Q6ZPL9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx55Q6ZPL9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.85■■□□□ 1.73
Ddx55Q6ZPL9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx55Q6ZPL9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx55Q6ZPL9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ddx55Q6ZPL9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.85■■□□□ 1.73
Ddx55Q6ZPL9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Etf1-202ENSMUST00000180351 108 ntBASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx55Q6ZPL9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx55Q6ZPL9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx55Q6ZPL9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Ddx55Q6ZPL9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx55Q6ZPL9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx55Q6ZPL9 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.83■■□□□ 1.73
Ddx55Q6ZPL9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.72
Ddx55Q6ZPL9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Ddx55Q6ZPL9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx55Q6ZPL9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.82■■□□□ 1.72
Ddx55Q6ZPL9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ddx55Q6ZPL9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Ddx55Q6ZPL9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx55Q6ZPL9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx55Q6ZPL9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.79■■□□□ 1.72
Ddx55Q6ZPL9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms