Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sdf4Q61112 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sdf4Q61112 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Sdf4Q61112 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sdf4Q61112 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sdf4Q61112 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sdf4Q61112 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sdf4Q61112 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.59■■□□□ 1.21
Sdf4Q61112 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sdf4Q61112 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Sdf4Q61112 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.59■■□□□ 1.21
Sdf4Q61112 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sdf4Q61112 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Sdf4Q61112 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sdf4Q61112 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.58■■□□□ 1.21
Sdf4Q61112 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sdf4Q61112 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.58■■□□□ 1.2
Sdf4Q61112 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sdf4Q61112 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.57■■□□□ 1.2
Sdf4Q61112 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sdf4Q61112 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sdf4Q61112 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sdf4Q61112 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.57■■□□□ 1.2
Sdf4Q61112 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sdf4Q61112 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sdf4Q61112 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sdf4Q61112 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sdf4Q61112 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.55■■□□□ 1.2
Sdf4Q61112 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sdf4Q61112 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.55■■□□□ 1.2
Sdf4Q61112 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.54■■□□□ 1.2
Sdf4Q61112 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sdf4Q61112 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Sdf4Q61112 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sdf4Q61112 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sdf4Q61112 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sdf4Q61112 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sdf4Q61112 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sdf4Q61112 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sdf4Q61112 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
Sdf4Q61112 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sdf4Q61112 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Sdf4Q61112 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sdf4Q61112 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sdf4Q61112 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sdf4Q61112 Gm44428-201ENSMUST00000204474 874 ntBASIC22.51■■□□□ 1.19
Sdf4Q61112 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Sdf4Q61112 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sdf4Q61112 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sdf4Q61112 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sdf4Q61112 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sdf4Q61112 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.5■■□□□ 1.19
Sdf4Q61112 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sdf4Q61112 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.49■■□□□ 1.19
Sdf4Q61112 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sdf4Q61112 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.49■■□□□ 1.19
Sdf4Q61112 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sdf4Q61112 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sdf4Q61112 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sdf4Q61112 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Sdf4Q61112 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sdf4Q61112 Gm11175-201ENSMUST00000116172 543 ntBASIC22.48■■□□□ 1.19
Sdf4Q61112 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sdf4Q61112 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Sdf4Q61112 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sdf4Q61112 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.47■■□□□ 1.19
Sdf4Q61112 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sdf4Q61112 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Sdf4Q61112 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
Sdf4Q61112 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Sdf4Q61112 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sdf4Q61112 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sdf4Q61112 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.46■■□□□ 1.19
Sdf4Q61112 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sdf4Q61112 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sdf4Q61112 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sdf4Q61112 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sdf4Q61112 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.45■■□□□ 1.18
Sdf4Q61112 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sdf4Q61112 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.44■■□□□ 1.18
Sdf4Q61112 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sdf4Q61112 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sdf4Q61112 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sdf4Q61112 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.44■■□□□ 1.18
Sdf4Q61112 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sdf4Q61112 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sdf4Q61112 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.43■■□□□ 1.18
Sdf4Q61112 Mir6538-201ENSMUST00000183713 110 ntBASIC22.43■■□□□ 1.18
Sdf4Q61112 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sdf4Q61112 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sdf4Q61112 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sdf4Q61112 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Sdf4Q61112 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sdf4Q61112 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sdf4Q61112 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Sdf4Q61112 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sdf4Q61112 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sdf4Q61112 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sdf4Q61112 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Sdf4Q61112 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms