Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Urb1Q571H0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Urb1Q571H0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Urb1Q571H0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.58■□□□□ 0.89
Urb1Q571H0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.58■□□□□ 0.89
Urb1Q571H0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Urb1Q571H0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Urb1Q571H0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.58■□□□□ 0.88
Urb1Q571H0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Urb1Q571H0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Urb1Q571H0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Urb1Q571H0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Urb1Q571H0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Urb1Q571H0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Urb1Q571H0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Urb1Q571H0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Urb1Q571H0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Urb1Q571H0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Urb1Q571H0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Urb1Q571H0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.56■□□□□ 0.88
Urb1Q571H0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.56■□□□□ 0.88
Urb1Q571H0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Urb1Q571H0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Urb1Q571H0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Urb1Q571H0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Urb1Q571H0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Urb1Q571H0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.54■□□□□ 0.88
Urb1Q571H0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Urb1Q571H0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Urb1Q571H0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.54■□□□□ 0.88
Urb1Q571H0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Urb1Q571H0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Urb1Q571H0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.53■□□□□ 0.88
Urb1Q571H0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.53■□□□□ 0.88
Urb1Q571H0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Urb1Q571H0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Urb1Q571H0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.52■□□□□ 0.88
Urb1Q571H0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Urb1Q571H0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Urb1Q571H0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.52■□□□□ 0.88
Urb1Q571H0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Urb1Q571H0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Urb1Q571H0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
Urb1Q571H0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Urb1Q571H0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Urb1Q571H0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.5■□□□□ 0.87
Urb1Q571H0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Urb1Q571H0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Urb1Q571H0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Urb1Q571H0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Urb1Q571H0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Urb1Q571H0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Urb1Q571H0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Urb1Q571H0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Urb1Q571H0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Urb1Q571H0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Urb1Q571H0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Urb1Q571H0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Urb1Q571H0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.47■□□□□ 0.87
Urb1Q571H0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Urb1Q571H0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Urb1Q571H0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Urb1Q571H0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Urb1Q571H0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Urb1Q571H0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Urb1Q571H0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Urb1Q571H0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Urb1Q571H0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.46■□□□□ 0.87
Urb1Q571H0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Urb1Q571H0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Urb1Q571H0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Urb1Q571H0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Urb1Q571H0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Urb1Q571H0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
Urb1Q571H0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Urb1Q571H0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.45■□□□□ 0.86
Urb1Q571H0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Urb1Q571H0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Urb1Q571H0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.44■□□□□ 0.86
Urb1Q571H0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.44■□□□□ 0.86
Urb1Q571H0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Urb1Q571H0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Urb1Q571H0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Urb1Q571H0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Urb1Q571H0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Urb1Q571H0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Urb1Q571H0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Urb1Q571H0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms